Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm25833-201ENSMUST00000104137 133 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm15018-201ENSMUST00000117090 633 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm14786-201ENSMUST00000117127 944 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm14163-201ENSMUST00000117342 217 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm4910-201ENSMUST00000119605 366 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm15038-201ENSMUST00000122144 296 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 AF357341-201ENSMUST00000083088 75 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lima1Q9ERG0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
Lima1Q9ERG0 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm9157-201ENSMUST00000117673 225 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm13064-201ENSMUST00000119125 557 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm12691-201ENSMUST00000120186 456 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm24961-201ENSMUST00000157918 184 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm17030-201ENSMUST00000167016 393 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm24819-201ENSMUST00000175094 166 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Mir6393-201ENSMUST00000183709 94 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm44355-201ENSMUST00000200417 104 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm18585-201ENSMUST00000215197 556 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm18903-201ENSMUST00000215343 480 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Lima1Q9ERG0 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Mir1198-201ENSMUST00000116995 121 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm12568-201ENSMUST00000117362 624 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm13379-201ENSMUST00000118053 621 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm22730-201ENSMUST00000158085 171 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm10075-201ENSMUST00000162030 545 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm20612-201ENSMUST00000176318 236 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm25817-201ENSMUST00000177758 121 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm24766-201ENSMUST00000179182 121 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm26988-201ENSMUST00000183296 945 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm37164-201ENSMUST00000192809 637 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm37431-201ENSMUST00000195102 111 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm37490-201ENSMUST00000195566 724 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm4528-201ENSMUST00000207905 551 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm19219-201ENSMUST00000215863 724 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm17917-201ENSMUST00000218561 953 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm5175-202ENSMUST00000219699 529 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms