Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm11982-201ENSMUST00000121480 314 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm16250-201ENSMUST00000148974 256 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm26312-201ENSMUST00000157769 165 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm23554-201ENSMUST00000157818 110 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm25713-201ENSMUST00000158625 109 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Mir5134-201ENSMUST00000175529 78 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm42832-201ENSMUST00000196361 745 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Rnu3a-202ENSMUST00000196710 213 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm44852-201ENSMUST00000207950 369 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm19232-201ENSMUST00000211621 652 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm8249-201ENSMUST00000219225 465 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 AC132112.1-201ENSMUST00000226354 505 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Rnu3a-201ENSMUST00000083936 214 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.77□□□□□ -1.97
RTRAFQ9CQE8 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Mir804-201ENSMUST00000103251 95 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm22019-201ENSMUST00000104359 96 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm11488-201ENSMUST00000117277 863 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm23792-201ENSMUST00000122557 93 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm22889-201ENSMUST00000158639 58 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm25369-201ENSMUST00000158848 132 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Mir5127-201ENSMUST00000175295 71 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm27163-201ENSMUST00000184767 409 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm28304-201ENSMUST00000185977 312 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm29256-201ENSMUST00000189094 312 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm28484-201ENSMUST00000190606 312 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm36934-201ENSMUST00000192007 306 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm20162-201ENSMUST00000193629 871 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm17967-201ENSMUST00000195319 647 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm18791-201ENSMUST00000204611 726 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 AC154838.1-201ENSMUST00000228944 911 ntBASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTRAFQ9CQE8 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm11869-201ENSMUST00000118701 329 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm12313-201ENSMUST00000121347 421 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm27355-201ENSMUST00000185045 128 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm8790-201ENSMUST00000194108 322 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm43116-201ENSMUST00000199789 195 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm43239-201ENSMUST00000200131 201 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm46327-201ENSMUST00000218240 365 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm5176-202ENSMUST00000220267 583 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 AC096628.1-201ENSMUST00000226060 641 ntBASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RTRAFQ9CQE8 Gm22829-201ENSMUST00000083771 106 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms