Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm42666-201ENSMUST00000201954 152 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm19131-201ENSMUST00000203408 789 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm10916-201ENSMUST00000080330 483 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm24430-201ENSMUST00000104077 104 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm25876-201ENSMUST00000104329 119 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm14067-201ENSMUST00000119340 314 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm15266-201ENSMUST00000119635 255 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm14500-201ENSMUST00000121647 113 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm22960-201ENSMUST00000122517 104 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm25667-201ENSMUST00000157701 275 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm23499-201ENSMUST00000157736 268 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm22211-201ENSMUST00000158097 156 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm22841-201ENSMUST00000158443 62 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Mir6393-201ENSMUST00000183709 94 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm27165-201ENSMUST00000183951 232 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm27457-201ENSMUST00000184771 156 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm38109-201ENSMUST00000195386 181 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm19457-201ENSMUST00000200995 448 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm43925-201ENSMUST00000203498 206 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm45081-201ENSMUST00000206281 572 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Gm26439-201ENSMUST00000082592 106 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ushbp1Q8R370 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.05□□□□□ -1.6
Ushbp1Q8R370 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm15379-201ENSMUST00000121224 648 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm9593-201ENSMUST00000166034 469 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC5.04□□□□□ -1.6
Ushbp1Q8R370 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms