Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26423-201ENSMUST00000104277 128 ntBASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm43478-201ENSMUST00000200381 292 ntBASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm18359-201ENSMUST00000173024 1459 ntBASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC2.69□□□□□ -1.98
Col6a6Q8C6K9 Gm25485-201ENSMUST00000104120 132 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm9427-201ENSMUST00000116187 651 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm3757-201ENSMUST00000125878 675 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm18843-201ENSMUST00000194982 719 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm26379-202ENSMUST00000200225 132 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm18387-201ENSMUST00000220333 702 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm24446-201ENSMUST00000083982 156 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm7646-201ENSMUST00000198590 1346 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm26247-201ENSMUST00000116702 91 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm22227-201ENSMUST00000157356 259 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Mir3075-201ENSMUST00000175340 85 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm37533-201ENSMUST00000193848 545 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm42758-201ENSMUST00000202146 283 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm20946-201ENSMUST00000212367 461 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.68□□□□□ -1.98
Col6a6Q8C6K9 Gm8430-201ENSMUST00000119780 471 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Mir1903-201ENSMUST00000122574 80 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm25528-201ENSMUST00000180264 132 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm36991-201ENSMUST00000191800 648 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm19104-201ENSMUST00000198392 679 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm25466-201ENSMUST00000103995 132 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm25808-201ENSMUST00000122784 284 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm26933-201ENSMUST00000182320 827 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Mir8090-201ENSMUST00000185078 136 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm28094-201ENSMUST00000185262 390 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm7422-201ENSMUST00000220115 640 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 AC166358.4-201ENSMUST00000223030 105 ntBASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a6Q8C6K9 Gm12878-201ENSMUST00000118744 332 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm44623-201ENSMUST00000207934 434 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm38240-201ENSMUST00000195110 2487 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm13511-201ENSMUST00000121167 363 ntBASIC2.66□□□□□ -1.98
Col6a6Q8C6K9 Gm23325-201ENSMUST00000157422 129 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms