Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm13311-201ENSMUST00000117863 379 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm11825-201ENSMUST00000120710 736 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm15428-201ENSMUST00000121352 333 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm27540-201ENSMUST00000184950 187 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm2914-201ENSMUST00000186120 328 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm28429-201ENSMUST00000188521 363 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm37272-201ENSMUST00000193401 488 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm37817-201ENSMUST00000195276 434 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm43554-201ENSMUST00000199987 186 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm43418-201ENSMUST00000201334 428 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm35931-201ENSMUST00000203931 448 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm22358-201ENSMUST00000082877 122 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm23511-201ENSMUST00000083084 164 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm25188-201ENSMUST00000083913 122 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm23294-201ENSMUST00000104150 164 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm6134-201ENSMUST00000117265 171 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm14669-201ENSMUST00000118841 250 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm23829-201ENSMUST00000157392 270 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm26352-201ENSMUST00000158223 125 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm25603-201ENSMUST00000158361 105 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Mir1963-201ENSMUST00000158594 59 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm9294-201ENSMUST00000165198 789 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm7335-201ENSMUST00000172475 373 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Mir3062-201ENSMUST00000174986 105 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm26400-201ENSMUST00000175012 85 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm18728-201ENSMUST00000186155 753 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm8745-201ENSMUST00000207846 782 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm45704-201ENSMUST00000212582 403 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm22974-201ENSMUST00000083301 103 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Mir188-201ENSMUST00000083464 68 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Gm25008-201ENSMUST00000083809 81 ntBASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim47Q8C0E3 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm11923-201ENSMUST00000118135 508 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm11447-201ENSMUST00000118983 858 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm14570-201ENSMUST00000119444 391 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm14765-201ENSMUST00000121954 326 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm26320-201ENSMUST00000157742 306 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm18325-201ENSMUST00000203228 835 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Gm7825-201ENSMUST00000204046 416 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Olfr1285-201ENSMUST00000208523 903 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms