Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm27538-201ENSMUST00000185065 294 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm18775-201ENSMUST00000190763 586 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm38261-201ENSMUST00000192608 316 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm37272-201ENSMUST00000193401 488 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm18414-201ENSMUST00000210858 694 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm18644-201ENSMUST00000211458 815 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm45499-201ENSMUST00000211656 280 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm45530-201ENSMUST00000211658 225 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm46146-201ENSMUST00000217483 346 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm25147-201ENSMUST00000083030 105 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.61□□□□□ -1.67
Trerf1Q8BXJ2 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm13806-201ENSMUST00000117822 325 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm14901-201ENSMUST00000119001 283 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm11357-201ENSMUST00000119758 954 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm12044-201ENSMUST00000120335 213 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm22345-201ENSMUST00000122644 107 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm13092-201ENSMUST00000136346 260 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm22793-201ENSMUST00000157227 330 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm26171-201ENSMUST00000158422 131 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm3030-201ENSMUST00000163410 516 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm22243-201ENSMUST00000178754 120 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm21850-201ENSMUST00000179792 359 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm29550-201ENSMUST00000185543 285 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm6501-201ENSMUST00000187178 916 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm20885-201ENSMUST00000190192 654 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm29740-201ENSMUST00000193182 655 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm36866-201ENSMUST00000193343 657 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm36047-201ENSMUST00000193659 657 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm20857-201ENSMUST00000194766 657 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm20858-201ENSMUST00000195459 657 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Trav15d-3-201ENSMUST00000198604 167 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm38395-201ENSMUST00000199904 830 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm33626-201ENSMUST00000206790 828 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Mecom-201ENSMUST00000061088 348 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trerf1Q8BXJ2 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm26387-201ENSMUST00000104238 132 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm22591-201ENSMUST00000104243 106 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm15443-201ENSMUST00000118947 820 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm12358-201ENSMUST00000121842 520 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm22960-201ENSMUST00000122517 104 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm23959-201ENSMUST00000157208 324 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm26173-201ENSMUST00000158416 136 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm15796-201ENSMUST00000162135 204 ntBASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trerf1Q8BXJ2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms