Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm22726-201ENSMUST00000158089 179 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Mir6963-201ENSMUST00000183535 71 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm38201-201ENSMUST00000192143 387 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm5548-201ENSMUST00000055878 397 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm336-201ENSMUST00000186376 1480 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm11898-201ENSMUST00000117161 385 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm13228-201ENSMUST00000118937 634 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm25047-201ENSMUST00000122667 104 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm22561-201ENSMUST00000157331 84 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Mir7074-201ENSMUST00000183884 63 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm19080-201ENSMUST00000196082 550 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm6240-201ENSMUST00000208014 473 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm17829-201ENSMUST00000219782 344 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm23460-201ENSMUST00000083258 109 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc40Q8BI79 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm11876-201ENSMUST00000120002 269 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm11896-201ENSMUST00000121105 820 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm6058-201ENSMUST00000154261 399 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm8641-201ENSMUST00000186995 826 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm43704-201ENSMUST00000196164 496 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm6590-201ENSMUST00000203343 687 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm45380-201ENSMUST00000210465 315 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm25481-201ENSMUST00000083221 158 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc40Q8BI79 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm15364-201ENSMUST00000119618 585 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm11692-201ENSMUST00000122121 902 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm11403-201ENSMUST00000122195 369 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm15147-201ENSMUST00000122263 483 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm22613-201ENSMUST00000122679 292 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm24976-201ENSMUST00000158972 135 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm10067-201ENSMUST00000179462 348 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms