Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm28629-201ENSMUST00000187309 263 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm43078-201ENSMUST00000197222 168 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm44083-201ENSMUST00000203114 337 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm43914-201ENSMUST00000203592 594 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm45249-201ENSMUST00000211021 348 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm7948-201ENSMUST00000212607 844 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Mir690-201ENSMUST00000102110 109 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm11367-201ENSMUST00000117802 120 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm9850-201ENSMUST00000117916 227 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm22073-201ENSMUST00000122668 189 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm25621-201ENSMUST00000157223 114 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm24059-201ENSMUST00000157493 312 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm22596-201ENSMUST00000157601 316 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm23047-201ENSMUST00000177661 94 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm27960-201ENSMUST00000183445 184 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Mir3970-201ENSMUST00000199287 90 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm6520-201ENSMUST00000200636 410 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm22423-201ENSMUST00000082861 184 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.43□□□□□ -1.54
Ubp1Q811S7 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ubp1Q811S7 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm12235-201ENSMUST00000118596 170 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm14627-201ENSMUST00000118931 567 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm12640-201ENSMUST00000120097 310 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm13745-201ENSMUST00000121994 527 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm23743-201ENSMUST00000157389 274 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm23872-201ENSMUST00000175432 77 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm5558-201ENSMUST00000178933 495 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm29376-201ENSMUST00000189357 835 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm37961-201ENSMUST00000192729 299 ntBASIC5.42□□□□□ -1.54
Ubp1Q811S7 Gm38150-201ENSMUST00000192996 452 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms