Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm23068-201ENSMUST00000158239 293 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Mir6344-201ENSMUST00000183462 104 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm38098-201ENSMUST00000194115 241 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm18011-201ENSMUST00000203717 565 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm29781-201ENSMUST00000203862 478 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm18120-201ENSMUST00000220079 511 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm17915-201ENSMUST00000222077 548 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm23096-201ENSMUST00000083447 107 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm14915-201ENSMUST00000120747 204 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm14129-201ENSMUST00000122436 291 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm23069-201ENSMUST00000158240 311 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm23179-201ENSMUST00000158693 304 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm23473-201ENSMUST00000158883 116 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm26556-201ENSMUST00000180645 320 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Mir7056-201ENSMUST00000183776 59 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm28390-201ENSMUST00000185212 700 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm28967-201ENSMUST00000187351 281 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm28299-201ENSMUST00000189908 339 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm18403-201ENSMUST00000192907 529 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm37495-201ENSMUST00000194590 264 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm32308-201ENSMUST00000203053 280 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm19131-201ENSMUST00000203408 789 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm44472-201ENSMUST00000204922 943 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm23939-201ENSMUST00000082880 133 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm23460-201ENSMUST00000083258 109 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm22293-201ENSMUST00000083314 109 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim56Q80VI1 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.7□□□□□ -1.5
Trim56Q80VI1 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm16106-201ENSMUST00000119187 294 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm14927-201ENSMUST00000120283 454 ntBASIC5.69□□□□□ -1.5
Trim56Q80VI1 Gm13149-201ENSMUST00000122071 339 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms