Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim28Q62318 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm25481-201ENSMUST00000083221 158 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim28Q62318 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim28Q62318 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim28Q62318 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim28Q62318 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Trim28Q62318 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim28Q62318 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Fus-202ENSMUST00000079045 2623 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Trim28Q62318 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm14299-201ENSMUST00000117586 397 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm8475-201ENSMUST00000118211 526 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm9078-201ENSMUST00000119126 617 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm12837-201ENSMUST00000120131 373 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm14530-201ENSMUST00000122391 333 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim28Q62318 Snora81-201ENSMUST00000157310 178 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm7241-201ENSMUST00000159853 357 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm2862-201ENSMUST00000161524 328 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm15914-201ENSMUST00000161922 309 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim28Q62318 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm27599-201ENSMUST00000183758 174 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm29550-201ENSMUST00000185543 285 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm8392-201ENSMUST00000185647 835 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Gm29335-201ENSMUST00000188361 459 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm37300-201ENSMUST00000193327 280 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm38053-201ENSMUST00000193938 160 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm37495-201ENSMUST00000194590 264 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm36953-201ENSMUST00000195295 268 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim28Q62318 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Gm17893-201ENSMUST00000203017 770 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm44099-201ENSMUST00000203299 112 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm45553-201ENSMUST00000209929 507 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Gm8748-201ENSMUST00000211125 587 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim28Q62318 Mir34b-201ENSMUST00000083558 84 ntBASIC5.37□□□□□ -1.55
Trim28Q62318 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim28Q62318 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim28Q62318 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim28Q62318 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim28Q62318 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim28Q62318 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim28Q62318 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim28Q62318 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim28Q62318 Gm12427-201ENSMUST00000117719 302 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm14107-201ENSMUST00000117774 330 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm8757-201ENSMUST00000119660 372 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim28Q62318 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim28Q62318 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim28Q62318 Gm24438-201ENSMUST00000157893 115 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm24961-201ENSMUST00000157918 184 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm22101-201ENSMUST00000157928 103 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm26024-201ENSMUST00000158657 322 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm9892-201ENSMUST00000182415 992 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.36□□□□□ -1.55
Trim28Q62318 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim28Q62318 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim28Q62318 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim28Q62318 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Trim28Q62318 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.36□□□□□ -1.55
Trim28Q62318 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim28Q62318 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim28Q62318 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim28Q62318 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim28Q62318 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim28Q62318 Mir92b-201ENSMUST00000102300 83 ntBASIC5.35□□□□□ -1.55
Trim28Q62318 Gm24318-201ENSMUST00000104490 131 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms