Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm23902-201ENSMUST00000157571 134 ntBASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm22532-201ENSMUST00000158822 140 ntBASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn9aQ62205 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn9aQ62205 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm22988-201ENSMUST00000122759 144 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn9aQ62205 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm44016-201ENSMUST00000203463 164 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm18602-201ENSMUST00000209794 851 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn9aQ62205 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm22970-201ENSMUST00000083304 186 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn9aQ62205 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.7□□□□□ -1.82
Scn9aQ62205 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn9aQ62205 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn9aQ62205 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm21990-201ENSMUST00000124692 383 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm25048-201ENSMUST00000158598 91 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm38330-201ENSMUST00000192743 959 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm23136-201ENSMUST00000083425 99 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn9aQ62205 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm25485-201ENSMUST00000104120 132 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Scn9aQ62205 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn9aQ62205 Snora31-201ENSMUST00000083213 130 ntBASIC3.69□□□□□ -1.82
Scn9aQ62205 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn9aQ62205 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn9aQ62205 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn9aQ62205 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scn9aQ62205 Mir680-3-201ENSMUST00000102298 87 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn9aQ62205 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.68□□□□□ -1.82
Scn9aQ62205 Gm32447-201ENSMUST00000194265 697 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Gm19620-201ENSMUST00000195972 434 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Gm42539-201ENSMUST00000197009 308 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Gm43521-201ENSMUST00000197838 255 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Gm43107-201ENSMUST00000198729 255 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Mir99a-201ENSMUST00000083596 65 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn9aQ62205 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Scn9aQ62205 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn9aQ62205 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.68□□□□□ -1.82
Scn9aQ62205 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scn9aQ62205 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Mir344c-201ENSMUST00000103919 92 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm15103-201ENSMUST00000119893 871 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm38075-201ENSMUST00000191979 920 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm43655-201ENSMUST00000197367 222 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm21112-201ENSMUST00000212224 578 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm7760-201ENSMUST00000212265 578 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm7540-201ENSMUST00000219764 926 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm10242-201ENSMUST00000090064 330 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn9aQ62205 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Scn9aQ62205 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm4468-201ENSMUST00000170206 294 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn9aQ62205 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.67□□□□□ -1.82
Scn9aQ62205 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms