Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm31532-201ENSMUST00000203555 767 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm18540-201ENSMUST00000204025 526 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm44703-201ENSMUST00000205724 248 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm26064-201ENSMUST00000083381 109 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm14681-201ENSMUST00000118047 411 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm13419-201ENSMUST00000121711 271 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm14581-201ENSMUST00000121726 198 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm23326-201ENSMUST00000157419 105 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm22600-201ENSMUST00000157598 269 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm24905-201ENSMUST00000158129 104 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm22367-201ENSMUST00000178930 132 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm27733-201ENSMUST00000184803 68 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm43039-201ENSMUST00000202883 963 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Gm22864-201ENSMUST00000083950 130 ntBASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3bQ3ULL6 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Upf3bQ3ULL6 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Upf3bQ3ULL6 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm23942-201ENSMUST00000101956 107 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm14687-201ENSMUST00000120206 363 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm25572-201ENSMUST00000157527 172 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm9613-201ENSMUST00000171662 196 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm5983-201ENSMUST00000197739 770 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Gm24144-201ENSMUST00000082632 111 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.58□□□□□ -1.84
Upf3bQ3ULL6 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm24142-201ENSMUST00000101960 107 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm15951-201ENSMUST00000118377 400 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm14739-201ENSMUST00000120424 802 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm26254-201ENSMUST00000122491 118 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm25977-201ENSMUST00000158697 85 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm25839-201ENSMUST00000158921 103 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm22108-201ENSMUST00000177961 106 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm7094-201ENSMUST00000178379 366 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm24798-201ENSMUST00000179334 106 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm20162-201ENSMUST00000193629 871 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm18597-201ENSMUST00000209519 694 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm45420-201ENSMUST00000211243 425 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms