Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm23496-201ENSMUST00000157741 248 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm25923-201ENSMUST00000158312 138 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm5558-201ENSMUST00000178933 495 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm5116-201ENSMUST00000187732 463 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm29627-201ENSMUST00000187984 463 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm28779-201ENSMUST00000189678 323 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm29332-201ENSMUST00000190829 227 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm38075-201ENSMUST00000191979 920 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm37353-201ENSMUST00000194497 313 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm45232-201ENSMUST00000207811 162 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ssrp1Q08943 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm6065-201ENSMUST00000081336 492 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm23626-201ENSMUST00000082458 133 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm22287-201ENSMUST00000083197 107 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm6043-201ENSMUST00000099961 492 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.14□□□□□ -1.59
Ssrp1Q08943 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm23709-201ENSMUST00000104364 130 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm22870-201ENSMUST00000157501 112 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm22716-201ENSMUST00000177596 107 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm7094-201ENSMUST00000178379 366 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Mir6382-201ENSMUST00000184055 110 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm29484-201ENSMUST00000186067 324 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm28255-201ENSMUST00000187101 694 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm29148-201ENSMUST00000188140 336 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm5731-201ENSMUST00000190969 481 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm37636-201ENSMUST00000193583 359 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm38221-201ENSMUST00000195146 365 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm8069-201ENSMUST00000197887 154 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Mir6994-201ENSMUST00000198985 73 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm43407-201ENSMUST00000199816 317 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm6303-201ENSMUST00000210123 471 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm18116-201ENSMUST00000220920 537 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Mir19a-201ENSMUST00000083482 82 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Mir30b-201ENSMUST00000083542 96 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.13□□□□□ -1.59
Ssrp1Q08943 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.13□□□□□ -1.59
Ssrp1Q08943 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ssrp1Q08943 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Ssrp1Q08943 Mir592-201ENSMUST00000102113 96 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ssrp1Q08943 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm12568-201ENSMUST00000117362 624 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm13454-201ENSMUST00000118166 483 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm14516-201ENSMUST00000120012 252 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm14867-201ENSMUST00000120156 866 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm15480-201ENSMUST00000120442 519 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm13232-201ENSMUST00000121816 632 ntBASIC5.12□□□□□ -1.59
Ssrp1Q08943 Gm9225-201ENSMUST00000121921 836 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms