Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.07□□□□□ -1.6
Ebf1Q07802 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.07□□□□□ -1.6
Ebf1Q07802 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ebf1Q07802 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.07□□□□□ -1.6
Ebf1Q07802 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Ebf1Q07802 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ebf1Q07802 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm23608-201ENSMUST00000104545 128 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm14125-201ENSMUST00000113442 680 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm12285-201ENSMUST00000117347 233 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm11408-201ENSMUST00000117889 519 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm11822-201ENSMUST00000119177 415 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm11862-201ENSMUST00000119678 659 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.06□□□□□ -1.6
Ebf1Q07802 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm26177-201ENSMUST00000178683 107 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm27161-201ENSMUST00000183960 562 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Mir6401-201ENSMUST00000184499 109 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Mir6975-201ENSMUST00000184879 61 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm18505-201ENSMUST00000187360 790 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm2497-201ENSMUST00000189539 601 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm37743-201ENSMUST00000194645 376 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm43510-201ENSMUST00000197922 353 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm42758-201ENSMUST00000202146 283 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm44041-201ENSMUST00000203678 396 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm45402-201ENSMUST00000211796 223 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm23627-201ENSMUST00000082459 107 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm22502-201ENSMUST00000082488 107 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm24149-201ENSMUST00000082757 107 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm23679-201ENSMUST00000083161 119 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.06□□□□□ -1.6
Ebf1Q07802 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ebf1Q07802 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ebf1Q07802 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ebf1Q07802 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ebf1Q07802 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ebf1Q07802 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm11219-201ENSMUST00000118565 358 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm16106-201ENSMUST00000119187 294 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm13475-201ENSMUST00000119290 234 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm6797-201ENSMUST00000119440 512 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm14815-201ENSMUST00000120060 488 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm13787-201ENSMUST00000120422 168 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm14821-201ENSMUST00000121975 435 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm25665-201ENSMUST00000157695 110 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm22951-201ENSMUST00000179471 107 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm28390-201ENSMUST00000185212 700 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Ebf1Q07802 Gm37492-201ENSMUST00000191948 376 ntBASIC5.05□□□□□ -1.6
Ebf1Q07802 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms