Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm13728-201ENSMUST00000117471 400 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm15275-201ENSMUST00000154752 347 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm21171-201ENSMUST00000180048 673 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm37550-201ENSMUST00000193230 463 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm29950-201ENSMUST00000195273 237 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm20946-201ENSMUST00000212367 461 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 AC121844.1-201ENSMUST00000218706 137 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm7984-201ENSMUST00000060640 538 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm24533-201ENSMUST00000083138 196 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.3□□□□□ -1.4
Col17a1Q07563 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col17a1Q07563 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col17a1Q07563 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col17a1Q07563 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col17a1Q07563 AC132336.1-201ENSMUST00000222844 1740 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm37300-201ENSMUST00000193327 280 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm37601-201ENSMUST00000194922 394 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm6240-201ENSMUST00000208014 473 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm45658-201ENSMUST00000209197 580 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col17a1Q07563 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Col17a1Q07563 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col17a1Q07563 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col17a1Q07563 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col17a1Q07563 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm37831-201ENSMUST00000191685 1787 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm43826-201ENSMUST00000199604 2612 ntBASIC6.29□□□□□ -1.4
Col17a1Q07563 Gm14931-201ENSMUST00000111079 253 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm13574-201ENSMUST00000120482 394 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm26141-201ENSMUST00000175299 126 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm29641-201ENSMUST00000188955 259 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm42976-201ENSMUST00000200313 222 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm8209-201ENSMUST00000206386 553 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm25818-201ENSMUST00000083282 164 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm25485-201ENSMUST00000104120 132 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm12924-201ENSMUST00000121747 318 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm22156-201ENSMUST00000158409 141 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm2862-201ENSMUST00000161524 328 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm20612-201ENSMUST00000176318 236 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm21754-201ENSMUST00000177550 479 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm27190-201ENSMUST00000184890 542 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm42594-201ENSMUST00000199511 246 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm2189-201ENSMUST00000201419 429 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm44084-201ENSMUST00000203947 409 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm19908-201ENSMUST00000204684 391 ntBASIC6.28□□□□□ -1.4
Col17a1Q07563 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col17a1Q07563 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col17a1Q07563 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col17a1Q07563 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col17a1Q07563 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.27□□□□□ -1.41
Col17a1Q07563 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col17a1Q07563 AC153969.1-201ENSMUST00000214047 2605 ntBASIC6.27□□□□□ -1.41
Col17a1Q07563 Gm43881-201ENSMUST00000203051 2530 ntBASIC6.27□□□□□ -1.41
Col17a1Q07563 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col17a1Q07563 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col17a1Q07563 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms