Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm24507-201ENSMUST00000157683 134 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm23499-201ENSMUST00000157736 268 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm20526-201ENSMUST00000173416 158 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm14527-201ENSMUST00000179300 639 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm24306-201ENSMUST00000180229 79 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm29031-201ENSMUST00000185316 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm29000-201ENSMUST00000185444 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm28204-201ENSMUST00000185934 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm28290-201ENSMUST00000186505 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm28161-201ENSMUST00000186669 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm28749-209ENSMUST00000189599 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm7449-201ENSMUST00000194393 663 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm33163-201ENSMUST00000194504 614 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm43541-201ENSMUST00000197208 581 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.02□□□□□ -1.61
Sox9Q04887 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox9Q04887 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox9Q04887 AC192333.1-201ENSMUST00000224573 376 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Gm16261-201ENSMUST00000096813 205 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox9Q04887 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox9Q04887 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Sox9Q04887 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox9Q04887 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox9Q04887 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox9Q04887 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.02□□□□□ -1.61
Sox9Q04887 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox9Q04887 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm26075-201ENSMUST00000104062 121 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm13627-201ENSMUST00000119700 706 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm14831-201ENSMUST00000120253 409 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm22792-201ENSMUST00000157225 133 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm26350-201ENSMUST00000157531 288 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm16125-201ENSMUST00000159003 339 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm25670-201ENSMUST00000178423 107 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm26239-201ENSMUST00000178842 107 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm24267-201ENSMUST00000179841 107 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm28304-201ENSMUST00000185977 312 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm28666-201ENSMUST00000186649 274 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm28625-201ENSMUST00000188309 205 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm29256-201ENSMUST00000189094 312 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm28484-201ENSMUST00000190606 312 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm9227-201ENSMUST00000194733 566 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm37404-201ENSMUST00000195726 359 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm43238-201ENSMUST00000196463 359 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm43472-201ENSMUST00000200175 154 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm44816-201ENSMUST00000206666 477 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox9Q04887 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox9Q04887 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm24292-201ENSMUST00000082888 107 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Gm24610-201ENSMUST00000083270 109 ntBASIC5.01□□□□□ -1.61
Sox9Q04887 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox9Q04887 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox9Q04887 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox9Q04887 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox9Q04887 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox9Q04887 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Sox9Q04887 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox9Q04887 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox9Q04887 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5□□□□□ -1.61
Sox9Q04887 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox9Q04887 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox9Q04887 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox9Q04887 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms