Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Shox2P70390 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Shox2P70390 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.32□□□□□ -1.88
Shox2P70390 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Shox2P70390 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Shox2P70390 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Shox2P70390 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
Shox2P70390 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Shox2P70390 Gm24273-201ENSMUST00000102332 164 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm24987-201ENSMUST00000104453 134 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Shox2P70390 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Shox2P70390 Gm14383-201ENSMUST00000121637 386 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.31□□□□□ -1.88
Shox2P70390 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Shox2P70390 Gm20526-201ENSMUST00000173416 158 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.31□□□□□ -1.88
Shox2P70390 Mir129b-201ENSMUST00000197461 65 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm43232-201ENSMUST00000201346 364 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm43039-201ENSMUST00000202883 963 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.31□□□□□ -1.88
Shox2P70390 Gm7407-201ENSMUST00000208301 568 ntBASIC3.31□□□□□ -1.88
Shox2P70390 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.31□□□□□ -1.88
Shox2P70390 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Shox2P70390 Gm9309-201ENSMUST00000223537 546 ntBASIC3.31□□□□□ -1.88
Shox2P70390 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
Shox2P70390 Gm7099-201ENSMUST00000080066 554 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm23738-201ENSMUST00000082828 171 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm25205-201ENSMUST00000082841 103 ntBASIC3.31□□□□□ -1.88
Shox2P70390 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm23136-201ENSMUST00000083425 99 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm25005-201ENSMUST00000083812 156 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Shox2P70390 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Shox2P70390 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.31□□□□□ -1.88
Shox2P70390 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Shox2P70390 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.3□□□□□ -1.88
Shox2P70390 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Gm24281-201ENSMUST00000104234 136 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm12982-201ENSMUST00000117408 190 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm11598-201ENSMUST00000119257 357 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm15142-201ENSMUST00000121013 856 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm14905-201ENSMUST00000122351 639 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm23716-201ENSMUST00000157348 144 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm22059-201ENSMUST00000157544 104 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm23773-201ENSMUST00000158985 296 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm16490-201ENSMUST00000165299 351 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Mir5134-201ENSMUST00000175529 78 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.3□□□□□ -1.88
Shox2P70390 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm26988-201ENSMUST00000183296 945 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Mir6408-201ENSMUST00000183643 91 ntBASIC3.3□□□□□ -1.88
Shox2P70390 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Gm37490-201ENSMUST00000195566 724 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm34091-201ENSMUST00000200875 604 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm29815-201ENSMUST00000202418 178 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm45553-201ENSMUST00000209929 507 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Gm36247-201ENSMUST00000211834 285 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.3□□□□□ -1.88
Shox2P70390 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.3□□□□□ -1.88
Shox2P70390 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.3□□□□□ -1.88
Shox2P70390 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Shox2P70390 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shox2P70390 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm22304-201ENSMUST00000082688 129 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Snord35b-201ENSMUST00000082833 87 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.3□□□□□ -1.88
Shox2P70390 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shox2P70390 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shox2P70390 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shox2P70390 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shox2P70390 Gm14971-201ENSMUST00000117980 663 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Gm12230-201ENSMUST00000118301 454 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Gm13717-201ENSMUST00000119868 365 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Gm12095-201ENSMUST00000121962 816 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Gm26371-201ENSMUST00000157829 104 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Gm23782-201ENSMUST00000157939 120 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Mir5098-201ENSMUST00000175320 82 ntBASIC3.29□□□□□ -1.88
Shox2P70390 Mir1251-201ENSMUST00000175486 84 ntBASIC3.29□□□□□ -1.88
Shox2P70390 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shox2P70390 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shox2P70390 Gm37495-201ENSMUST00000194590 264 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms