Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm42566-201ENSMUST00000197120 643 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm29736-201ENSMUST00000198189 385 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm18258-201ENSMUST00000210413 542 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.37□□□□□ -1.55
Sox1P53783 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm22456-201ENSMUST00000082578 125 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm25792-201ENSMUST00000083289 100 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.37□□□□□ -1.55
Sox1P53783 AW046200-203ENSMUST00000211787 2479 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Sox1P53783 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox1P53783 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Gm12255-201ENSMUST00000117184 284 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm15106-201ENSMUST00000119691 821 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm14564-201ENSMUST00000122159 294 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm11403-201ENSMUST00000122195 369 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm25718-201ENSMUST00000158632 118 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm23179-201ENSMUST00000158693 304 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Mir5624-201ENSMUST00000176635 61 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm26180-201ENSMUST00000179942 107 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm23523-201ENSMUST00000180190 107 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm37966-201ENSMUST00000193122 326 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm45614-201ENSMUST00000209994 721 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gm17989-201ENSMUST00000211543 412 ntBASIC5.36□□□□□ -1.55
Sox1P53783 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.36□□□□□ -1.55
Sox1P53783 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox1P53783 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm10038-201ENSMUST00000077233 441 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Sox1P53783 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Sox1P53783 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Sox1P53783 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.36□□□□□ -1.55
Sox1P53783 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.36□□□□□ -1.55
Sox1P53783 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox1P53783 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox1P53783 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.35□□□□□ -1.55
Sox1P53783 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sox1P53783 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sox1P53783 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.35□□□□□ -1.55
Sox1P53783 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Sox1P53783 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Gm24792-201ENSMUST00000104286 128 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm11936-201ENSMUST00000118323 160 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm11229-201ENSMUST00000121993 437 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox1P53783 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox1P53783 Gm23169-201ENSMUST00000157157 112 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm24439-201ENSMUST00000157894 117 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm8600-201ENSMUST00000186320 905 ntBASIC5.35□□□□□ -1.55
Sox1P53783 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms