Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.81□□□□□ -1.64
GdnfP48540 Gm17907-201ENSMUST00000173150 710 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm26400-201ENSMUST00000175012 85 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm24303-201ENSMUST00000178237 126 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm25361-201ENSMUST00000179358 76 ntBASIC4.81□□□□□ -1.64
GdnfP48540 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GdnfP48540 Gm28660-201ENSMUST00000186496 253 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GdnfP48540 Gm37338-201ENSMUST00000191986 127 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm19060-201ENSMUST00000201959 421 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm45405-201ENSMUST00000211544 609 ntBASIC4.81□□□□□ -1.64
GdnfP48540 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.81□□□□□ -1.64
GdnfP48540 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.81□□□□□ -1.64
GdnfP48540 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.81□□□□□ -1.64
GdnfP48540 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.81□□□□□ -1.64
GdnfP48540 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.81□□□□□ -1.64
GdnfP48540 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.81□□□□□ -1.64
GdnfP48540 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GdnfP48540 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GdnfP48540 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GdnfP48540 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GdnfP48540 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GdnfP48540 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.81□□□□□ -1.64
GdnfP48540 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.81□□□□□ -1.64
GdnfP48540 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GdnfP48540 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm14591-201ENSMUST00000120407 518 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm22867-201ENSMUST00000157499 109 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm24784-201ENSMUST00000157640 62 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm25846-201ENSMUST00000158013 135 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm6872-201ENSMUST00000165001 700 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Mir5125-201ENSMUST00000175240 79 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm22932-201ENSMUST00000175510 72 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm10410-201ENSMUST00000180138 384 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm28399-201ENSMUST00000186221 318 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm28572-201ENSMUST00000187444 318 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm29350-201ENSMUST00000189141 541 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm29365-201ENSMUST00000189461 699 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm29665-201ENSMUST00000191457 528 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm43033-201ENSMUST00000199682 425 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm43501-201ENSMUST00000202513 107 ntBASIC4.8□□□□□ -1.64
GdnfP48540 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm38574-201ENSMUST00000211855 640 ntBASIC4.8□□□□□ -1.64
GdnfP48540 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.8□□□□□ -1.64
GdnfP48540 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GdnfP48540 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GdnfP48540 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.8□□□□□ -1.64
GdnfP48540 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
GdnfP48540 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GdnfP48540 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GdnfP48540 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GdnfP48540 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GdnfP48540 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GdnfP48540 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GdnfP48540 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GdnfP48540 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
GdnfP48540 Gm15531-201ENSMUST00000118062 252 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm12722-201ENSMUST00000118507 493 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm14838-201ENSMUST00000118913 248 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm7219-201ENSMUST00000119619 297 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm13725-201ENSMUST00000122139 207 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm24001-201ENSMUST00000158463 85 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm25660-201ENSMUST00000158470 104 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm3170-201ENSMUST00000168753 850 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm3348-201ENSMUST00000177813 850 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm27928-201ENSMUST00000183747 256 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Mir6412-201ENSMUST00000184477 97 ntBASIC4.79□□□□□ -1.64
GdnfP48540 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms