Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
HttP42859 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
HttP42859 Mir542-201ENSMUST00000102186 85 ntBASIC3.14□□□□□ -1.91
HttP42859 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HttP42859 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HttP42859 Gm34091-201ENSMUST00000200875 604 ntBASIC3.14□□□□□ -1.91
HttP42859 Gm18193-201ENSMUST00000210017 772 ntBASIC3.14□□□□□ -1.91
HttP42859 Gm18388-201ENSMUST00000222339 557 ntBASIC3.14□□□□□ -1.91
HttP42859 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HttP42859 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
HttP42859 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
HttP42859 Gm11253-201ENSMUST00000118486 201 ntBASIC3.14□□□□□ -1.91
HttP42859 n-R5s201-201ENSMUST00000122622 116 ntBASIC3.14□□□□□ -1.91
HttP42859 Gm24885-201ENSMUST00000158783 270 ntBASIC3.14□□□□□ -1.91
HttP42859 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.14□□□□□ -1.91
HttP42859 Gm19498-201ENSMUST00000191128 331 ntBASIC3.14□□□□□ -1.91
HttP42859 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.14□□□□□ -1.91
HttP42859 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HttP42859 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HttP42859 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HttP42859 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HttP42859 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
HttP42859 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HttP42859 Gm13406-201ENSMUST00000121991 256 ntBASIC3.13□□□□□ -1.91
HttP42859 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HttP42859 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HttP42859 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.13□□□□□ -1.91
HttP42859 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HttP42859 Gm5384-201ENSMUST00000120313 463 ntBASIC3.13□□□□□ -1.91
HttP42859 Mir7013-201ENSMUST00000183540 72 ntBASIC3.13□□□□□ -1.91
HttP42859 Mir3569-201ENSMUST00000185080 58 ntBASIC3.13□□□□□ -1.91
HttP42859 Gm38283-201ENSMUST00000193041 695 ntBASIC3.13□□□□□ -1.91
HttP42859 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.13□□□□□ -1.91
HttP42859 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HttP42859 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HttP42859 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.13□□□□□ -1.91
HttP42859 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HttP42859 Mir669d-201ENSMUST00000104644 121 ntBASIC3.13□□□□□ -1.91
HttP42859 Gm23548-201ENSMUST00000158963 106 ntBASIC3.13□□□□□ -1.91
HttP42859 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.13□□□□□ -1.91
HttP42859 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.13□□□□□ -1.91
HttP42859 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HttP42859 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
HttP42859 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HttP42859 Gm23551-201ENSMUST00000116852 121 ntBASIC3.12□□□□□ -1.91
HttP42859 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Gm12757-201ENSMUST00000119465 800 ntBASIC3.12□□□□□ -1.91
HttP42859 Gm14506-201ENSMUST00000121165 536 ntBASIC3.12□□□□□ -1.91
HttP42859 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.12□□□□□ -1.91
HttP42859 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HttP42859 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HttP42859 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.12□□□□□ -1.91
HttP42859 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC3.12□□□□□ -1.91
HttP42859 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HttP42859 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.12□□□□□ -1.91
HttP42859 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HttP42859 Gm12118-201ENSMUST00000119766 532 ntBASIC3.12□□□□□ -1.91
HttP42859 Gm20718-201ENSMUST00000176058 259 ntBASIC3.12□□□□□ -1.91
HttP42859 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HttP42859 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.12□□□□□ -1.91
HttP42859 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HttP42859 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HttP42859 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HttP42859 Gm16471-201ENSMUST00000121940 618 ntBASIC3.11□□□□□ -1.91
HttP42859 Gm16355-201ENSMUST00000128606 231 ntBASIC3.11□□□□□ -1.91
HttP42859 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.11□□□□□ -1.91
HttP42859 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HttP42859 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HttP42859 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.11□□□□□ -1.91
HttP42859 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HttP42859 Gm22149-201ENSMUST00000104442 136 ntBASIC3.11□□□□□ -1.91
HttP42859 Gm13511-201ENSMUST00000121167 363 ntBASIC3.11□□□□□ -1.91
HttP42859 Gm24075-201ENSMUST00000158175 72 ntBASIC3.11□□□□□ -1.91
HttP42859 Gm25476-201ENSMUST00000175125 185 ntBASIC3.11□□□□□ -1.91
HttP42859 Gm44157-201ENSMUST00000204720 410 ntBASIC3.11□□□□□ -1.91
HttP42859 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.11□□□□□ -1.91
HttP42859 Gm7753-201ENSMUST00000221007 867 ntBASIC3.11□□□□□ -1.91
HttP42859 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HttP42859 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.1□□□□□ -1.91
HttP42859 Gm14607-201ENSMUST00000119119 491 ntBASIC3.1□□□□□ -1.91
HttP42859 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.1□□□□□ -1.91
HttP42859 Gm5263-201ENSMUST00000163646 601 ntBASIC3.1□□□□□ -1.91
HttP42859 Gm9696-202ENSMUST00000191541 830 ntBASIC3.1□□□□□ -1.91
HttP42859 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC3.1□□□□□ -1.91
HttP42859 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HttP42859 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HttP42859 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HttP42859 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HttP42859 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
HttP42859 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HttP42859 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.1□□□□□ -1.91
HttP42859 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HttP42859 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.1□□□□□ -1.91
HttP42859 Gm22730-201ENSMUST00000158085 171 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms