Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col2a1P28481 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col2a1P28481 Mir290a-201ENSMUST00000104627 83 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Mir1195-201ENSMUST00000116818 98 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm23402-201ENSMUST00000178130 107 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm27532-201ENSMUST00000183726 113 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Mir8090-201ENSMUST00000185078 136 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm29320-201ENSMUST00000185235 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm29179-202ENSMUST00000186138 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm28598-201ENSMUST00000186490 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm29448-201ENSMUST00000186675 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm29314-201ENSMUST00000186800 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm28253-202ENSMUST00000187971 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm29268-201ENSMUST00000188669 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col2a1P28481 Gm29169-201ENSMUST00000189835 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm28978-201ENSMUST00000191120 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm37172-201ENSMUST00000191926 615 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm18660-201ENSMUST00000199542 629 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col2a1P28481 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col2a1P28481 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col2a1P28481 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col2a1P28481 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col2a1P28481 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.6□□□□□ -1.83
Col2a1P28481 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.59□□□□□ -1.83
Col2a1P28481 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Col2a1P28481 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col2a1P28481 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col2a1P28481 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Col2a1P28481 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.59□□□□□ -1.83
Col2a1P28481 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Col2a1P28481 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Col2a1P28481 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm12788-201ENSMUST00000119090 308 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm7071-201ENSMUST00000120458 462 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm11229-201ENSMUST00000121993 437 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.59□□□□□ -1.84
Col2a1P28481 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm24019-201ENSMUST00000178620 107 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm26243-201ENSMUST00000179260 107 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm28002-201ENSMUST00000184832 100 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col2a1P28481 Gm28614-201ENSMUST00000186483 458 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.59□□□□□ -1.84
Col2a1P28481 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col2a1P28481 Gm6841-201ENSMUST00000220602 598 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.59□□□□□ -1.84
Col2a1P28481 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm23296-201ENSMUST00000082555 107 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Gm24859-201ENSMUST00000082729 107 ntBASIC3.59□□□□□ -1.84
Col2a1P28481 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col2a1P28481 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col2a1P28481 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col2a1P28481 Gm26387-201ENSMUST00000104238 132 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 Gm12985-201ENSMUST00000118376 183 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col2a1P28481 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col2a1P28481 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 Gm24350-202ENSMUST00000198309 132 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.58□□□□□ -1.84
Col2a1P28481 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col2a1P28481 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.58□□□□□ -1.84
Col2a1P28481 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col2a1P28481 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col2a1P28481 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col2a1P28481 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col2a1P28481 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col2a1P28481 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col2a1P28481 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col2a1P28481 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.57□□□□□ -1.84
Col2a1P28481 Gm9432-201ENSMUST00000117810 759 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Gm12739-201ENSMUST00000119769 382 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Gm16274-201ENSMUST00000139251 592 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Gm25373-201ENSMUST00000158156 115 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Gm18522-201ENSMUST00000173947 650 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.57□□□□□ -1.84
Col2a1P28481 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.57□□□□□ -1.84
Col2a1P28481 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.57□□□□□ -1.84
Col2a1P28481 Gm43746-201ENSMUST00000200028 317 ntBASIC3.57□□□□□ -1.84
Col2a1P28481 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms