Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.6□□□□□ -1.83
Col1a1P11087 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col1a1P11087 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.6□□□□□ -1.83
Col1a1P11087 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col1a1P11087 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col1a1P11087 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col1a1P11087 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col1a1P11087 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col1a1P11087 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col1a1P11087 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.59□□□□□ -1.83
Col1a1P11087 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col1a1P11087 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col1a1P11087 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col1a1P11087 Gm14659-201ENSMUST00000117667 843 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 Gm12787-201ENSMUST00000119234 396 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC3.59□□□□□ -1.84
Col1a1P11087 Gm44343-201ENSMUST00000196702 90 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 Gm4052-201ENSMUST00000220890 451 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col1a1P11087 Gm10025-201ENSMUST00000079568 372 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 Gm22970-201ENSMUST00000083304 186 ntBASIC3.59□□□□□ -1.84
Col1a1P11087 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col1a1P11087 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col1a1P11087 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col1a1P11087 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col1a1P11087 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col1a1P11087 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col1a1P11087 Gm24122-201ENSMUST00000104107 132 ntBASIC3.58□□□□□ -1.84
Col1a1P11087 Gm16445-201ENSMUST00000120399 714 ntBASIC3.58□□□□□ -1.84
Col1a1P11087 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col1a1P11087 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC3.58□□□□□ -1.84
Col1a1P11087 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
Col1a1P11087 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Col1a1P11087 Gm32447-201ENSMUST00000194265 697 ntBASIC3.58□□□□□ -1.84
Col1a1P11087 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.58□□□□□ -1.84
Col1a1P11087 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col1a1P11087 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.58□□□□□ -1.84
Col1a1P11087 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.58□□□□□ -1.84
Col1a1P11087 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.58□□□□□ -1.84
Col1a1P11087 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.58□□□□□ -1.84
Col1a1P11087 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Col1a1P11087 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col1a1P11087 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Col1a1P11087 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col1a1P11087 Gm12723-201ENSMUST00000120700 451 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm11456-201ENSMUST00000121070 256 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.57□□□□□ -1.84
Col1a1P11087 Gm25456-201ENSMUST00000157952 109 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm17117-201ENSMUST00000163665 299 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm27379-201ENSMUST00000183730 123 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm17967-201ENSMUST00000195319 647 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm34314-201ENSMUST00000203622 367 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col1a1P11087 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col1a1P11087 Gm4057-201ENSMUST00000221407 368 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.57□□□□□ -1.84
Col1a1P11087 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col1a1P11087 n-R5s205-201ENSMUST00000083149 125 ntBASIC3.57□□□□□ -1.84
Col1a1P11087 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col1a1P11087 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col1a1P11087 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col1a1P11087 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Col1a1P11087 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col1a1P11087 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col1a1P11087 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col1a1P11087 Gm12985-201ENSMUST00000118376 183 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Gm15493-201ENSMUST00000119461 528 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.56□□□□□ -1.84
Col1a1P11087 Gm6969-201ENSMUST00000140065 342 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col1a1P11087 Mir7068-201ENSMUST00000183439 74 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Gm42593-201ENSMUST00000198469 377 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.56□□□□□ -1.84
Col1a1P11087 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col1a1P11087 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.56□□□□□ -1.84
Col1a1P11087 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col1a1P11087 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col1a1P11087 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col1a1P11087 Mir291a-201ENSMUST00000104815 82 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm12788-201ENSMUST00000119090 308 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm14926-201ENSMUST00000120650 508 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm25280-201ENSMUST00000157269 101 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col1a1P11087 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.55□□□□□ -1.84
Col1a1P11087 Gm4859-201ENSMUST00000199625 787 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm43992-201ENSMUST00000204358 197 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm25581-201ENSMUST00000083410 164 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col1a1P11087 Gm44220-201ENSMUST00000203784 2487 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.55□□□□□ -1.84
Col1a1P11087 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm15103-201ENSMUST00000119893 871 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm25808-201ENSMUST00000122784 284 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm14562-201ENSMUST00000129885 543 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm24358-201ENSMUST00000158424 288 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms