Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm29365-201ENSMUST00000189461 699 ntBASIC2.96□□□□□ -1.94
Col5a1O88207 Gm42850-201ENSMUST00000202094 201 ntBASIC2.96□□□□□ -1.94
Col5a1O88207 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.96□□□□□ -1.94
Col5a1O88207 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col5a1O88207 Gm10242-201ENSMUST00000090064 330 ntBASIC2.96□□□□□ -1.94
Col5a1O88207 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col5a1O88207 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col5a1O88207 Gm14385-201ENSMUST00000116315 876 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Gm26477-201ENSMUST00000122617 323 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Gm26297-201ENSMUST00000179464 132 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Gm44343-201ENSMUST00000196702 90 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col5a1O88207 Gm25581-201ENSMUST00000083410 164 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col5a1O88207 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col5a1O88207 Gm37674-201ENSMUST00000194177 1834 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Gm44286-201ENSMUST00000204098 1487 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Gm44682-201ENSMUST00000208501 2614 ntBASIC2.95□□□□□ -1.94
Col5a1O88207 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 Gm18719-201ENSMUST00000196696 1413 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col5a1O88207 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col5a1O88207 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col5a1O88207 Gm23766-201ENSMUST00000103894 80 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 Gm22849-201ENSMUST00000157713 307 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 Gm25553-201ENSMUST00000158076 79 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col5a1O88207 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col5a1O88207 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.94□□□□□ -1.94
Col5a1O88207 Gm44519-201ENSMUST00000206486 122 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 Gm44688-201ENSMUST00000209083 537 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 AC123064.2-201ENSMUST00000217758 193 ntBASIC2.94□□□□□ -1.94
Col5a1O88207 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.94□□□□□ -1.94
Col5a1O88207 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col5a1O88207 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col5a1O88207 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col5a1O88207 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Col5a1O88207 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC2.94□□□□□ -1.94
Col5a1O88207 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col5a1O88207 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Gm14518-201ENSMUST00000117351 542 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm8569-201ENSMUST00000117630 647 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Mir3965-201ENSMUST00000175570 69 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm44016-201ENSMUST00000203463 164 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm44526-201ENSMUST00000204664 121 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm4052-201ENSMUST00000220890 451 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm22979-201ENSMUST00000082609 159 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Col5a1O88207 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col5a1O88207 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Gm26423-201ENSMUST00000104277 128 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col5a1O88207 Gm649-201ENSMUST00000117284 1054 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm12739-201ENSMUST00000119769 382 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm11260-201ENSMUST00000121163 942 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm22378-201ENSMUST00000157481 111 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm26866-201ENSMUST00000180414 802 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col5a1O88207 Zfp-ps-201ENSMUST00000185025 478 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm45252-201ENSMUST00000211579 397 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col5a1O88207 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col5a1O88207 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.93□□□□□ -1.94
Col5a1O88207 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col5a1O88207 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col5a1O88207 AC155921.1-201ENSMUST00000216568 3841 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col5a1O88207 Gm43526-201ENSMUST00000196666 1565 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col5a1O88207 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col5a1O88207 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col5a1O88207 Gm13064-201ENSMUST00000119125 557 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Gm22551-201ENSMUST00000157795 103 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Gm18953-201ENSMUST00000175694 300 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Gm21959-201ENSMUST00000178439 452 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col5a1O88207 Gm5552-201ENSMUST00000197149 515 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.92□□□□□ -1.94
Col5a1O88207 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col5a1O88207 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col5a1O88207 Gm25004-201ENSMUST00000083811 161 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.92□□□□□ -1.94
Col5a1O88207 Gm9343-201ENSMUST00000209016 2609 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms