Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm43594-201ENSMUST00000201153 3442 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a4A2AX52 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a4A2AX52 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Col6a4A2AX52 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a4A2AX52 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm12118-201ENSMUST00000119766 532 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.56□□□□□ -2
Col6a4A2AX52 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm28094-201ENSMUST00000185262 390 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm37533-201ENSMUST00000193848 545 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm42919-201ENSMUST00000197753 1284 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm42990-201ENSMUST00000199231 312 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm42581-201ENSMUST00000201774 966 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col6a4A2AX52 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a4A2AX52 AC151831.1-201ENSMUST00000227609 4033 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm12568-201ENSMUST00000117362 624 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm13379-201ENSMUST00000118053 621 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm10075-201ENSMUST00000162030 545 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm5527-201ENSMUST00000179821 642 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm27538-201ENSMUST00000185065 294 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm8319-201ENSMUST00000205708 641 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm21112-201ENSMUST00000212224 578 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Gm7760-201ENSMUST00000212265 578 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 AC122937.1-201ENSMUST00000226405 793 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col6a4A2AX52 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a4A2AX52 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a4A2AX52 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a4A2AX52 AC147615.2-201ENSMUST00000219876 2154 ntBASIC2.55□□□□□ -2
Col6a4A2AX52 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a4A2AX52 Gm26247-201ENSMUST00000116702 91 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm8260-201ENSMUST00000119230 353 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm24879-201ENSMUST00000158386 143 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a4A2AX52 Mir7068-201ENSMUST00000183439 74 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm28900-201ENSMUST00000185232 156 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.54□□□□□ -2
Col6a4A2AX52 Gm18843-201ENSMUST00000194982 719 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm44308-201ENSMUST00000197080 99 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm43892-201ENSMUST00000204373 265 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 AC171206.1-201ENSMUST00000213612 213 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a4A2AX52 Gm22979-201ENSMUST00000082609 159 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm43443-201ENSMUST00000202337 2393 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a4A2AX52 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a4A2AX52 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Col6a4A2AX52 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Col6a4A2AX52 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm18609-201ENSMUST00000203370 3601 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a4A2AX52 Gm650-201ENSMUST00000144428 1551 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Mir3076-201ENSMUST00000175415 60 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm21893-201ENSMUST00000179119 397 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a4A2AX52 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col6a4A2AX52 Mir7682-201ENSMUST00000198467 58 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 AC160134.1-201ENSMUST00000213450 551 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a4A2AX52 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a4A2AX52 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a4A2AX52 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Col6a4A2AX52 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.54□□□□□ -2
Col6a4A2AX52 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a4A2AX52 Gm5943-201ENSMUST00000119458 459 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm13121-201ENSMUST00000120637 632 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm25808-201ENSMUST00000122784 284 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.53□□□□□ -2
Col6a4A2AX52 Gm24930-201ENSMUST00000158315 83 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.53□□□□□ -2
Col6a4A2AX52 Mir6715-201ENSMUST00000184990 57 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm37996-201ENSMUST00000191859 367 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a4A2AX52 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a4A2AX52 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Col6a4A2AX52 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a4A2AX52 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Col6a4A2AX52 AC160931.3-201ENSMUST00000222111 2267 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm25485-201ENSMUST00000104120 132 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a4A2AX52 Gm14570-201ENSMUST00000119444 391 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm16274-201ENSMUST00000139251 592 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Mir3075-201ENSMUST00000175340 85 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.53□□□□□ -2
Col6a4A2AX52 Gm25528-201ENSMUST00000180264 132 ntBASIC2.53□□□□□ -2
Col6a4A2AX52 Gm17989-201ENSMUST00000211543 412 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms