Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm20486-201ENSMUST00000101544 128 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm22496-201ENSMUST00000104493 88 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm13457-201ENSMUST00000117885 267 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm13641-201ENSMUST00000117993 473 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm23232-201ENSMUST00000157300 105 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm25487-201ENSMUST00000158725 125 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm25175-201ENSMUST00000178712 79 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm2325-201ENSMUST00000186637 581 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm6137-201ENSMUST00000187552 578 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm9134-201ENSMUST00000193186 551 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm44208-201ENSMUST00000205199 421 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm45380-201ENSMUST00000210465 315 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 AC158395.1-201ENSMUST00000227206 452 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm10916-201ENSMUST00000080330 483 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm6462-201ENSMUST00000081488 304 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.6□□□□□ -1.51
Nubp1Q9R060 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Nubp1Q9R060 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nubp1Q9R060 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Nubp1Q9R060 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm13400-201ENSMUST00000117436 380 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm15058-201ENSMUST00000117689 458 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm15206-201ENSMUST00000119143 454 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm13541-201ENSMUST00000119519 283 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm13729-201ENSMUST00000120328 406 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm11584-201ENSMUST00000120636 325 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm12181-201ENSMUST00000121448 531 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm8761-201ENSMUST00000121507 955 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm14775-201ENSMUST00000122089 310 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm15237-201ENSMUST00000122104 469 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm25054-201ENSMUST00000157370 97 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm26186-201ENSMUST00000157689 125 ntBASIC5.59□□□□□ -1.51
Nubp1Q9R060 Gm23276-201ENSMUST00000157913 138 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms