Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.38□□□□□ -1.87
Scrt1Q99M85 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Gm24319-201ENSMUST00000083389 107 ntBASIC3.38□□□□□ -1.87
Scrt1Q99M85 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.38□□□□□ -1.87
Scrt1Q99M85 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.38□□□□□ -1.87
Scrt1Q99M85 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.38□□□□□ -1.87
Scrt1Q99M85 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Scrt1Q99M85 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Mir669l-201ENSMUST00000103771 98 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm12889-201ENSMUST00000118684 241 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm14906-201ENSMUST00000119265 390 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm24592-201ENSMUST00000122505 106 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Mir1934-201ENSMUST00000158127 83 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm17377-201ENSMUST00000165184 207 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Mir1264-201ENSMUST00000175381 86 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm18397-201ENSMUST00000176704 587 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm25598-201ENSMUST00000179031 107 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm27155-201ENSMUST00000183716 898 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Mir6993-201ENSMUST00000184912 65 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm37193-201ENSMUST00000193087 513 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm36985-201ENSMUST00000195595 379 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm36259-201ENSMUST00000197340 392 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm43345-201ENSMUST00000199484 269 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Snora31-201ENSMUST00000083213 130 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm22578-201ENSMUST00000083730 107 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.37□□□□□ -1.87
Scrt1Q99M85 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scrt1Q99M85 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scrt1Q99M85 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.36□□□□□ -1.87
Scrt1Q99M85 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scrt1Q99M85 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scrt1Q99M85 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scrt1Q99M85 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms