Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm5762-201ENSMUST00000119204 258 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm11704-201ENSMUST00000120031 214 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm13574-201ENSMUST00000120482 394 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm11233-201ENSMUST00000122357 634 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm22034-201ENSMUST00000157283 134 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm23592-201ENSMUST00000157859 117 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm23666-201ENSMUST00000158053 116 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm23112-201ENSMUST00000158606 125 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm10357-201ENSMUST00000159886 264 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Mir5112-201ENSMUST00000174897 60 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm27834-201ENSMUST00000183427 125 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Trbv8-201ENSMUST00000194020 285 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm9379-201ENSMUST00000196790 646 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Mir129b-201ENSMUST00000197461 65 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm44650-201ENSMUST00000206929 194 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm10704-201ENSMUST00000098952 730 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.35□□□□□ -1.87
Lsm1Q8VC85 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm14687-201ENSMUST00000120206 363 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm27033-201ENSMUST00000183226 544 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm28390-201ENSMUST00000185212 700 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm37219-201ENSMUST00000192036 926 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm37193-201ENSMUST00000193087 513 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm37239-201ENSMUST00000193510 141 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm32447-201ENSMUST00000194265 697 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm35876-201ENSMUST00000205044 459 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm9712-201ENSMUST00000210842 311 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm4263-202ENSMUST00000221392 667 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lsm1Q8VC85 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Lsm1Q8VC85 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.34□□□□□ -1.88
Lsm1Q8VC85 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Lsm1Q8VC85 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.34□□□□□ -1.88
Lsm1Q8VC85 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm22758-201ENSMUST00000102275 96 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm11253-201ENSMUST00000118486 201 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm12722-201ENSMUST00000118507 493 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm11913-201ENSMUST00000119094 336 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm15026-201ENSMUST00000119219 458 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm22730-201ENSMUST00000158085 171 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm23775-201ENSMUST00000158991 249 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Mir6914-201ENSMUST00000184999 69 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm6680-201ENSMUST00000192789 950 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Trbv28-201ENSMUST00000192804 264 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm18507-201ENSMUST00000218855 525 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm10042-201ENSMUST00000079884 78 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm25480-201ENSMUST00000083217 133 ntBASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lsm1Q8VC85 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.32□□□□□ -1.88
Lsm1Q8VC85 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.32□□□□□ -1.88
Lsm1Q8VC85 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms