Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm23121-201ENSMUST00000157653 173 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm24438-201ENSMUST00000157893 115 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm25553-201ENSMUST00000158076 79 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm24724-201ENSMUST00000158230 107 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm16134-201ENSMUST00000161714 336 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Mir5101-201ENSMUST00000175181 83 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm27861-201ENSMUST00000183920 214 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm43828-201ENSMUST00000196890 639 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm30155-201ENSMUST00000223458 339 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 AC133176.1-201ENSMUST00000226668 219 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm23928-201ENSMUST00000082469 145 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm12852-201ENSMUST00000119478 719 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm14903-201ENSMUST00000122435 537 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm22613-201ENSMUST00000122679 292 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm24910-201ENSMUST00000157289 272 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm24689-201ENSMUST00000157760 104 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm24636-201ENSMUST00000158673 288 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm16566-201ENSMUST00000160387 910 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm16545-201ENSMUST00000161968 463 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm44474-201ENSMUST00000196525 127 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm44054-201ENSMUST00000203814 372 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm18306-201ENSMUST00000207338 569 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm17991-201ENSMUST00000208139 297 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm8125-201ENSMUST00000216602 738 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm18774-201ENSMUST00000218269 601 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm3338-201ENSMUST00000220982 269 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Gm336-201ENSMUST00000186376 1480 ntBASIC5.07□□□□□ -1.6
Ushbp1Q8R370 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ushbp1Q8R370 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm25213-201ENSMUST00000102388 113 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm22498-201ENSMUST00000104497 86 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm12760-201ENSMUST00000117861 482 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm43601-201ENSMUST00000196294 945 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.06□□□□□ -1.6
Ushbp1Q8R370 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms