Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 AC160931.2-201ENSMUST00000221445 351 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 AC154515.2-201ENSMUST00000226093 406 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 AC123860.1-201ENSMUST00000228033 481 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 AC133076.1-201ENSMUST00000228074 484 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trim47Q8C0E3 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Trim47Q8C0E3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Trim47Q8C0E3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm15531-201ENSMUST00000118062 252 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm11804-201ENSMUST00000121663 468 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm24858-201ENSMUST00000158058 323 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm22537-201ENSMUST00000158172 199 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm11395-201ENSMUST00000181011 499 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm11394-201ENSMUST00000181421 517 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm19637-201ENSMUST00000185933 579 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm29479-201ENSMUST00000190352 455 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm19498-201ENSMUST00000191128 331 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm43975-201ENSMUST00000203023 481 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm10237-201ENSMUST00000078393 273 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim47Q8C0E3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm24482-201ENSMUST00000117005 93 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm8595-201ENSMUST00000118250 630 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm13725-201ENSMUST00000122139 207 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm23262-201ENSMUST00000158323 168 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm22420-201ENSMUST00000178795 126 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm25156-201ENSMUST00000179809 79 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm28017-201ENSMUST00000183434 126 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm27490-201ENSMUST00000184754 128 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Mir7087-201ENSMUST00000184840 70 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 CT009718.4-201ENSMUST00000221881 109 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm5955-201ENSMUST00000222712 219 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim47Q8C0E3 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim47Q8C0E3 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms