Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm24281-201ENSMUST00000104234 136 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm23133-201ENSMUST00000104255 135 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm11506-201ENSMUST00000122414 470 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm7909-201ENSMUST00000182688 614 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm20574-201ENSMUST00000182867 917 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Mir6414-201ENSMUST00000183685 82 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm20203-201ENSMUST00000192352 332 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm20162-201ENSMUST00000193629 871 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm25147-201ENSMUST00000083030 105 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm25200-201ENSMUST00000083094 130 ntBASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc40Q8BI79 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc40Q8BI79 Gm24951-201ENSMUST00000102182 109 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm23431-201ENSMUST00000104006 107 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Snord66-201ENSMUST00000104051 75 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm22219-201ENSMUST00000157562 319 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm5527-201ENSMUST00000179821 642 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm26556-201ENSMUST00000180645 320 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Mir6345-201ENSMUST00000184286 128 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm4248-201ENSMUST00000196905 316 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm45162-201ENSMUST00000209013 618 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm18645-202ENSMUST00000212222 760 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 AF357341-201ENSMUST00000083088 75 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Olfr713-201ENSMUST00000098139 975 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.96□□□□□ -1.78
Ccdc40Q8BI79 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Mir551b-201ENSMUST00000102165 98 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm23948-201ENSMUST00000104030 132 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm14282-201ENSMUST00000119484 240 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm14534-201ENSMUST00000120045 357 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm25605-201ENSMUST00000158364 124 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm23505-201ENSMUST00000158989 130 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm6625-201ENSMUST00000177870 272 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm24520-201ENSMUST00000179510 110 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm25412-201ENSMUST00000180258 107 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm17951-201ENSMUST00000198536 496 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm2314-201ENSMUST00000200391 586 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Gm44404-201ENSMUST00000203979 636 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc40Q8BI79 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm24855-201ENSMUST00000104848 97 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm14299-201ENSMUST00000117586 397 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm15377-201ENSMUST00000119594 246 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm12884-201ENSMUST00000120371 325 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm14008-201ENSMUST00000120483 274 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 Gm8244-201ENSMUST00000121254 264 ntBASIC3.94□□□□□ -1.78
Ccdc40Q8BI79 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms