Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Snord59a-201ENSMUST00000082844 74 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm22834-201ENSMUST00000102021 79 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm12053-201ENSMUST00000119022 252 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm13677-201ENSMUST00000120739 595 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm25294-201ENSMUST00000122791 104 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm25827-201ENSMUST00000157089 107 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm24419-201ENSMUST00000157875 332 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm15900-201ENSMUST00000161584 342 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm21999-201ENSMUST00000165985 387 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm25243-201ENSMUST00000174912 207 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm8532-201ENSMUST00000179174 461 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm8807-201ENSMUST00000179328 492 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm29045-201ENSMUST00000187278 698 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm9687-201ENSMUST00000189312 602 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm28098-201ENSMUST00000191361 699 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm8747-201ENSMUST00000195392 751 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm42758-201ENSMUST00000202146 283 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm44266-201ENSMUST00000205235 500 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm45232-201ENSMUST00000207811 162 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm23851-201ENSMUST00000083831 103 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.73□□□□□ -1.49
Trim56Q80VI1 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim56Q80VI1 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm23879-201ENSMUST00000116874 126 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm13250-201ENSMUST00000117209 753 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm12245-201ENSMUST00000117266 357 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm11372-201ENSMUST00000117348 570 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm14240-201ENSMUST00000120353 546 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm3053-201ENSMUST00000161709 616 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Mir3062-201ENSMUST00000174986 105 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm26828-201ENSMUST00000180640 172 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm28785-201ENSMUST00000187478 379 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm43043-201ENSMUST00000196579 412 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm43804-201ENSMUST00000198280 456 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm43710-201ENSMUST00000199583 452 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm19147-201ENSMUST00000199622 652 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm7948-201ENSMUST00000212607 844 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Mir338-201ENSMUST00000083666 98 ntBASIC5.72□□□□□ -1.49
Trim56Q80VI1 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim56Q80VI1 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
Trim56Q80VI1 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Trim56Q80VI1 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim56Q80VI1 Gm24124-201ENSMUST00000104103 132 ntBASIC5.71□□□□□ -1.5
Trim56Q80VI1 Mir879-201ENSMUST00000104703 76 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms