Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm15060-201ENSMUST00000119550 948 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm7618-201ENSMUST00000121643 171 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm15111-201ENSMUST00000122142 878 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm13602-201ENSMUST00000122405 493 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm9785-202ENSMUST00000144563 593 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm23179-201ENSMUST00000158693 304 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm23025-201ENSMUST00000158769 111 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim28Q62318 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm9613-201ENSMUST00000171662 196 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm4076-201ENSMUST00000179230 965 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim28Q62318 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm17954-201ENSMUST00000195893 607 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm43717-201ENSMUST00000198684 310 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm42594-201ENSMUST00000199511 246 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm31230-201ENSMUST00000199725 785 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm4052-201ENSMUST00000220890 451 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm3565-201ENSMUST00000222670 609 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm25578-201ENSMUST00000083406 104 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.4□□□□□ -1.55
Trim28Q62318 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.4□□□□□ -1.55
Trim28Q62318 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim28Q62318 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Trim28Q62318 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.4□□□□□ -1.55
Trim28Q62318 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.4□□□□□ -1.55
Trim28Q62318 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim28Q62318 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm15175-201ENSMUST00000117629 132 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm13743-201ENSMUST00000121486 724 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm25808-201ENSMUST00000122784 284 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm25979-201ENSMUST00000157177 138 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Mir5710-201ENSMUST00000176884 69 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm19280-201ENSMUST00000190191 205 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm29097-201ENSMUST00000190273 422 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm19774-201ENSMUST00000190667 114 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm18900-201ENSMUST00000193218 584 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm37416-201ENSMUST00000193596 318 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm43304-201ENSMUST00000196803 326 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm43384-201ENSMUST00000200569 637 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm7039-201ENSMUST00000205138 346 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm19761-201ENSMUST00000205372 391 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.39□□□□□ -1.55
Trim28Q62318 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim28Q62318 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm5185-201ENSMUST00000080271 619 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Gm24917-201ENSMUST00000083935 104 ntBASIC5.39□□□□□ -1.55
Trim28Q62318 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim28Q62318 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim28Q62318 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Trim28Q62318 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim28Q62318 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim28Q62318 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm14887-201ENSMUST00000119522 663 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm14678-201ENSMUST00000121396 482 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm14383-201ENSMUST00000121637 386 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm15157-201ENSMUST00000121852 702 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm11692-201ENSMUST00000122121 902 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm3111-201ENSMUST00000167426 490 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm21171-201ENSMUST00000180048 673 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm25284-201ENSMUST00000180345 141 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm27919-201ENSMUST00000185163 107 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm29534-201ENSMUST00000187328 382 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm42958-201ENSMUST00000197595 318 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm43345-201ENSMUST00000199484 269 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim28Q62318 Gm17829-201ENSMUST00000219782 344 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.38□□□□□ -1.55
Trim28Q62318 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms