Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm10444-201ENSMUST00000126708 148 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm5755-201ENSMUST00000152394 837 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm25456-201ENSMUST00000157952 109 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm18128-201ENSMUST00000172625 511 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm6155-201ENSMUST00000173735 341 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm8221-201ENSMUST00000178052 564 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm29428-201ENSMUST00000190086 409 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm38261-201ENSMUST00000192608 316 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm8599-201ENSMUST00000193033 457 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm38395-201ENSMUST00000199904 830 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm43198-201ENSMUST00000200927 326 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm43441-201ENSMUST00000201458 205 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm44757-201ENSMUST00000206373 157 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm18645-201ENSMUST00000209593 651 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm45727-201ENSMUST00000212886 572 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CtcfQ61164 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 AC161426.1-201ENSMUST00000214137 286 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CtcfQ61164 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
CtcfQ61164 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CtcfQ61164 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
CtcfQ61164 Gm23447-201ENSMUST00000082798 163 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.47□□□□□ -1.69
CtcfQ61164 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CtcfQ61164 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.46□□□□□ -1.69
CtcfQ61164 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.69
CtcfQ61164 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CtcfQ61164 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CtcfQ61164 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CtcfQ61164 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CtcfQ61164 Gm14050-201ENSMUST00000117052 346 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm14365-201ENSMUST00000117535 587 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm5943-201ENSMUST00000119458 459 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm12466-201ENSMUST00000121199 620 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm13194-201ENSMUST00000142299 311 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.46□□□□□ -1.7
CtcfQ61164 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.46□□□□□ -1.7
CtcfQ61164 Gm26393-201ENSMUST00000157625 129 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Mir5106-201ENSMUST00000174936 73 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC4.46□□□□□ -1.7
CtcfQ61164 Gm37878-201ENSMUST00000192108 387 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm46327-201ENSMUST00000218240 365 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC4.46□□□□□ -1.7
CtcfQ61164 AC156790.3-201ENSMUST00000226200 254 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CtcfQ61164 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CtcfQ61164 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CtcfQ61164 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CtcfQ61164 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CtcfQ61164 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CtcfQ61164 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.46□□□□□ -1.7
CtcfQ61164 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.45□□□□□ -1.7
CtcfQ61164 Gm14628-201ENSMUST00000117508 635 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm14534-201ENSMUST00000120045 357 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm15193-201ENSMUST00000120224 865 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm14360-201ENSMUST00000120670 393 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm13720-201ENSMUST00000120741 196 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm14916-201ENSMUST00000121904 204 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm25052-201ENSMUST00000122661 158 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm23022-201ENSMUST00000158768 180 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm16236-201ENSMUST00000159588 379 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Spanxn4-201ENSMUST00000172433 424 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CtcfQ61164 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CtcfQ61164 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CtcfQ61164 Gm29460-201ENSMUST00000188607 714 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.45□□□□□ -1.7
CtcfQ61164 Trbv11-201ENSMUST00000194354 260 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.45□□□□□ -1.7
CtcfQ61164 Gm42438-201ENSMUST00000197832 974 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm45081-201ENSMUST00000206281 572 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm46998-201ENSMUST00000221444 330 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms