Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 AC153553.1-201ENSMUST00000218257 684 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 CT571268.1-201ENSMUST00000222320 407 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 AC126439.1-201ENSMUST00000226772 2104 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 CT030238.1-201ENSMUST00000228393 442 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Gm6177-201ENSMUST00000085589 465 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Olfr895-201ENSMUST00000093864 951 ntBASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Scaf1Q5U4C3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm11284-201ENSMUST00000121910 1887 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm43923-201ENSMUST00000203992 2911 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm11912-201ENSMUST00000117235 264 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm11490-201ENSMUST00000118128 272 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm11346-201ENSMUST00000118346 704 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm14980-201ENSMUST00000121247 736 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm12422-201ENSMUST00000121431 302 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm24857-201ENSMUST00000158061 310 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm17148-201ENSMUST00000164702 249 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm26866-201ENSMUST00000180414 802 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm37070-201ENSMUST00000193272 460 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 AC153961.2-201ENSMUST00000218877 164 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 CT956049.1-201ENSMUST00000225671 763 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 n-R5s62-201ENSMUST00000082780 96 ntBASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf1Q5U4C3 Gm3978-201ENSMUST00000163406 2512 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm38260-201ENSMUST00000193573 3995 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm38243-201ENSMUST00000194737 1567 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm18432-201ENSMUST00000195568 1451 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm15364-201ENSMUST00000119618 585 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm26312-201ENSMUST00000157769 165 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm23513-201ENSMUST00000158181 133 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm23003-201ENSMUST00000179948 107 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Mir7056-201ENSMUST00000183776 59 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm29229-201ENSMUST00000188874 323 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm29489-201ENSMUST00000188934 324 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Mir20a-201ENSMUST00000083508 107 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Gm24763-201ENSMUST00000083688 190 ntBASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf1Q5U4C3 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm15773-201ENSMUST00000118665 1448 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Mir599-201ENSMUST00000102378 88 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm24160-201ENSMUST00000104594 126 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm22633-201ENSMUST00000179834 107 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm23523-201ENSMUST00000180190 107 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm24949-201ENSMUST00000183609 215 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm27490-201ENSMUST00000184754 128 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm28163-201ENSMUST00000187099 325 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm7721-201ENSMUST00000200446 546 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm35876-201ENSMUST00000205044 459 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 AL450317.1-201ENSMUST00000213941 291 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 AC164567.2-201ENSMUST00000219363 445 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm46193-201ENSMUST00000219399 364 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 AC166341.3-201ENSMUST00000221861 114 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 AC154603.1-201ENSMUST00000224355 313 ntBASIC7.11□□□□□ -1.27
Scaf1Q5U4C3 AC117656.1-201ENSMUST00000225826 339 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms