Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.01□□□□□ -1.77
Trim38Q5SZ99 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Trim38Q5SZ99 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm15159-201ENSMUST00000117062 764 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm15364-201ENSMUST00000119618 585 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm13737-201ENSMUST00000119793 232 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm14939-201ENSMUST00000120347 680 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm11896-201ENSMUST00000121105 820 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4□□□□□ -1.77
Trim38Q5SZ99 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4□□□□□ -1.77
Trim38Q5SZ99 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm23782-201ENSMUST00000157939 120 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm17030-201ENSMUST00000167016 393 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm17164-201ENSMUST00000169013 506 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm23799-201ENSMUST00000175559 120 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm24969-201ENSMUST00000180331 79 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm8641-201ENSMUST00000186995 826 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm18505-201ENSMUST00000187360 790 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm28615-201ENSMUST00000187527 482 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm28654-201ENSMUST00000189801 379 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm43704-201ENSMUST00000196164 496 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm43675-201ENSMUST00000199468 1184 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm18423-201ENSMUST00000205144 1074 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4□□□□□ -1.77
Trim38Q5SZ99 AC100590.2-201ENSMUST00000219028 215 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim38Q5SZ99 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4□□□□□ -1.77
Trim38Q5SZ99 AC115878.1-201ENSMUST00000227247 334 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 CT485608.1-201ENSMUST00000228759 389 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim38Q5SZ99 Gm23460-201ENSMUST00000083258 109 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim38Q5SZ99 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4□□□□□ -1.77
Trim38Q5SZ99 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm12467-201ENSMUST00000117625 745 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm13607-201ENSMUST00000117875 539 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm13379-201ENSMUST00000118053 621 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm15387-201ENSMUST00000120421 648 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm24960-201ENSMUST00000157923 90 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm16285-201ENSMUST00000162999 347 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm17063-201ENSMUST00000168135 456 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm5372-201ENSMUST00000187540 409 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm37164-201ENSMUST00000192809 637 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm45735-201ENSMUST00000212779 319 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm5175-202ENSMUST00000219699 529 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm5518-201ENSMUST00000084171 648 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim38Q5SZ99 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm14282-201ENSMUST00000119484 240 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm11506-201ENSMUST00000122414 470 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm22107-201ENSMUST00000122548 100 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm22988-201ENSMUST00000122759 144 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm6058-201ENSMUST00000154261 399 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms