Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23162-201ENSMUST00000175081 121 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm10784-201ENSMUST00000178715 238 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Mir3620-201ENSMUST00000184710 61 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm45879-201ENSMUST00000212521 392 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 AC155808.1-201ENSMUST00000219288 409 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm21937-201ENSMUST00000222825 218 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm23686-201ENSMUST00000083241 164 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm22828-201ENSMUST00000083768 107 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm45632-201ENSMUST00000211532 1888 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 AC163731.1-201ENSMUST00000225696 3118 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm44235-201ENSMUST00000204312 3058 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm13406-201ENSMUST00000121991 256 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm16345-201ENSMUST00000146065 158 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm24676-201ENSMUST00000158758 75 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm23700-201ENSMUST00000158842 102 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm16569-201ENSMUST00000160526 314 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Mir7222-201ENSMUST00000183740 75 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm9443-201ENSMUST00000188406 816 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm43601-201ENSMUST00000196294 945 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 AC183268.2-201ENSMUST00000214513 446 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 AL627387.1-201ENSMUST00000226063 250 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm23055-201ENSMUST00000082805 94 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm37205-201ENSMUST00000194820 2736 ntBASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim41Q5NCC3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm44660-201ENSMUST00000207134 2465 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm37174-201ENSMUST00000194699 3058 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm37607-201ENSMUST00000194925 2623 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm23274-201ENSMUST00000104056 130 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm2367-201ENSMUST00000192374 472 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm37882-201ENSMUST00000195254 196 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 AC125484.1-201ENSMUST00000223218 234 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm45311-201ENSMUST00000211086 1330 ntBASIC9.48□□□□□ -0.89
Trim41Q5NCC3 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm14304-201ENSMUST00000117272 446 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm14765-201ENSMUST00000121954 326 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Scarna13-201ENSMUST00000158164 275 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm43444-201ENSMUST00000198123 291 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm43975-201ENSMUST00000203023 481 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm45156-201ENSMUST00000207255 439 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Gm8672-201ENSMUST00000221200 332 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms