Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25764-201ENSMUST00000104092 134 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm14119-201ENSMUST00000119511 235 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm11896-201ENSMUST00000121105 820 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm23671-201ENSMUST00000157472 103 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm26045-201ENSMUST00000157862 97 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm20673-201ENSMUST00000177167 430 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm25525-201ENSMUST00000177701 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm26178-201ENSMUST00000177706 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm26465-201ENSMUST00000178517 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm24317-201ENSMUST00000178536 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm22910-201ENSMUST00000178568 132 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm25021-201ENSMUST00000179184 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm22995-201ENSMUST00000179670 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm24424-201ENSMUST00000179714 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm24389-201ENSMUST00000179962 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm25672-201ENSMUST00000180111 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Mir6413-201ENSMUST00000184049 108 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm29163-201ENSMUST00000188029 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm28191-201ENSMUST00000189112 211 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm44349-201ENSMUST00000197048 123 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm29884-201ENSMUST00000218403 453 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Snora7a-201ENSMUST00000082629 140 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm23815-201ENSMUST00000083231 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm10161-201ENSMUST00000091506 204 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm23520-201ENSMUST00000093736 107 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm12458-201ENSMUST00000119387 495 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm7855-201ENSMUST00000137737 687 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm27025-201ENSMUST00000182392 942 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm29064-201ENSMUST00000187014 813 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm28923-201ENSMUST00000187755 322 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm6510-201ENSMUST00000195916 574 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm9379-201ENSMUST00000196790 646 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm3010-201ENSMUST00000198805 448 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm43975-201ENSMUST00000203023 481 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm5649-201ENSMUST00000217918 951 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm9309-201ENSMUST00000223537 546 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
Upf3bQ3ULL6 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm24544-201ENSMUST00000103862 110 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm13873-201ENSMUST00000119208 427 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm11387-201ENSMUST00000120266 772 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm24936-201ENSMUST00000122598 247 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm22380-201ENSMUST00000157479 95 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm23152-201ENSMUST00000175322 116 ntBASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3bQ3ULL6 Gm28785-201ENSMUST00000187478 379 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms