Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ddb1Q3U1J4 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm13379-201ENSMUST00000118053 621 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm14887-201ENSMUST00000119522 663 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm15387-201ENSMUST00000120421 648 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm15267-201ENSMUST00000120888 464 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm23212-201ENSMUST00000122718 60 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm25150-201ENSMUST00000157121 60 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm25667-201ENSMUST00000157701 275 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm16588-201ENSMUST00000162889 355 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm23269-201ENSMUST00000178701 107 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm11392-201ENSMUST00000181419 710 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm28660-201ENSMUST00000186496 253 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm37771-201ENSMUST00000193121 265 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm8874-201ENSMUST00000196826 286 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm19243-201ENSMUST00000198592 269 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm43276-201ENSMUST00000199712 364 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm5518-201ENSMUST00000084171 648 ntBASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ddb1Q3U1J4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm22497-201ENSMUST00000104499 131 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm12261-201ENSMUST00000117499 645 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm15312-201ENSMUST00000118827 271 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm12607-201ENSMUST00000120724 493 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm11260-201ENSMUST00000121163 942 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm15309-201ENSMUST00000121644 240 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm12358-201ENSMUST00000121842 520 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm12087-201ENSMUST00000121878 258 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm17421-201ENSMUST00000167845 674 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm8807-201ENSMUST00000179328 492 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm10067-201ENSMUST00000179462 348 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm37603-201ENSMUST00000192368 219 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm43142-201ENSMUST00000198670 361 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm43424-201ENSMUST00000200484 253 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm44817-201ENSMUST00000205416 453 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm45553-201ENSMUST00000209929 507 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm18160-201ENSMUST00000214279 827 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 AC157017.2-201ENSMUST00000218354 777 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm23925-201ENSMUST00000082471 132 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Gm23736-201ENSMUST00000082553 75 ntBASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddb1Q3U1J4 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ddb1Q3U1J4 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddb1Q3U1J4 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddb1Q3U1J4 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms