Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm4263-202ENSMUST00000221392 667 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 Gm9309-201ENSMUST00000223537 546 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Hoxc4Q08624 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hoxc4Q08624 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxc4Q08624 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hoxc4Q08624 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxc4Q08624 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxc4Q08624 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.38□□□□□ -1.87
Hoxc4Q08624 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm24935-201ENSMUST00000103770 110 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm23609-201ENSMUST00000104542 127 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm14771-201ENSMUST00000118249 203 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm12902-201ENSMUST00000118389 322 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm11625-201ENSMUST00000119535 296 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm14687-201ENSMUST00000120206 363 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm14927-201ENSMUST00000120283 454 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm13460-201ENSMUST00000121274 353 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm14768-201ENSMUST00000122126 678 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm23168-201ENSMUST00000157156 143 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm28591-201ENSMUST00000185259 183 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm5309-201ENSMUST00000197416 677 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm4859-201ENSMUST00000199625 787 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm44513-201ENSMUST00000206811 439 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm36776-201ENSMUST00000207006 203 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm44927-201ENSMUST00000207573 716 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm18597-201ENSMUST00000209519 694 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm24144-201ENSMUST00000082632 111 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm22304-201ENSMUST00000082688 129 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm25810-201ENSMUST00000082752 108 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm26064-201ENSMUST00000083381 109 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.37□□□□□ -1.87
Hoxc4Q08624 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Hoxc4Q08624 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm22115-201ENSMUST00000103976 133 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm23923-201ENSMUST00000104108 133 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm14681-201ENSMUST00000118047 411 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm13155-201ENSMUST00000119277 646 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm11890-201ENSMUST00000119585 417 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm14534-201ENSMUST00000120045 357 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm8178-201ENSMUST00000121570 646 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm14810-201ENSMUST00000121628 486 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm14581-201ENSMUST00000121726 198 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm20542-201ENSMUST00000174582 372 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm25525-201ENSMUST00000177701 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm26178-201ENSMUST00000177706 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm26465-201ENSMUST00000178517 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm24317-201ENSMUST00000178536 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm25021-201ENSMUST00000179184 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm22995-201ENSMUST00000179670 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm24424-201ENSMUST00000179714 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm24389-201ENSMUST00000179962 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm25672-201ENSMUST00000180111 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Mir6413-201ENSMUST00000184049 108 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm27445-201ENSMUST00000184484 72 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm3454-201ENSMUST00000185571 412 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm29163-201ENSMUST00000188029 107 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm35405-201ENSMUST00000218754 400 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm8785-201ENSMUST00000220259 487 ntBASIC3.36□□□□□ -1.87
Hoxc4Q08624 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms