Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm7858-201ENSMUST00000190177 622 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm5731-201ENSMUST00000190969 481 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm37836-201ENSMUST00000195875 175 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm42475-201ENSMUST00000201212 295 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm44214-201ENSMUST00000204153 606 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Col6a1Q04857 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm5045-201ENSMUST00000027054 810 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a1Q04857 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm25699-201ENSMUST00000082896 167 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25088-201ENSMUST00000101803 79 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22021-201ENSMUST00000104353 107 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm14125-201ENSMUST00000113442 680 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22468-201ENSMUST00000116680 120 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm26248-201ENSMUST00000116700 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm26137-201ENSMUST00000116701 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm26190-201ENSMUST00000116704 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24617-201ENSMUST00000116705 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25778-201ENSMUST00000116713 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25774-201ENSMUST00000116717 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22102-201ENSMUST00000116730 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm23177-201ENSMUST00000116784 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24193-201ENSMUST00000116801 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24744-201ENSMUST00000116833 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24427-201ENSMUST00000116896 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22346-201ENSMUST00000116918 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm23606-201ENSMUST00000116938 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22029-201ENSMUST00000116940 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm26298-201ENSMUST00000116956 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm23844-201ENSMUST00000116959 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24484-201ENSMUST00000117009 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25347-201ENSMUST00000117026 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22112-201ENSMUST00000117032 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm12053-201ENSMUST00000119022 252 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm16106-201ENSMUST00000119187 294 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm13009-201ENSMUST00000121307 267 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24186-201ENSMUST00000157983 127 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm16038-201ENSMUST00000159317 193 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22991-201ENSMUST00000178126 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25754-201ENSMUST00000178653 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22419-201ENSMUST00000178780 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24802-201ENSMUST00000178897 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25208-201ENSMUST00000178964 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24567-201ENSMUST00000179294 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm23943-201ENSMUST00000179712 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm25228-201ENSMUST00000180121 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm23304-201ENSMUST00000180209 121 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Mir6412-201ENSMUST00000184477 97 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm4322-201ENSMUST00000191094 336 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm37455-201ENSMUST00000191993 529 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm37167-201ENSMUST00000194946 396 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm45236-201ENSMUST00000208632 229 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm8785-201ENSMUST00000220259 487 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm7040-201ENSMUST00000223271 443 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm23627-201ENSMUST00000082459 107 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms