Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm6461-201ENSMUST00000120015 633 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm23791-201ENSMUST00000122553 293 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm22718-201ENSMUST00000122701 315 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm24627-201ENSMUST00000122764 138 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm20542-201ENSMUST00000174582 372 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm28923-201ENSMUST00000187755 322 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm32340-201ENSMUST00000192883 259 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm43415-201ENSMUST00000201934 750 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm4057-201ENSMUST00000221407 368 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 AC117797.2-201ENSMUST00000224419 531 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm37868-201ENSMUST00000195578 2735 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm43259-201ENSMUST00000198446 3277 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 AC147615.2-201ENSMUST00000219876 2154 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm15780-201ENSMUST00000121283 935 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm12095-201ENSMUST00000121962 816 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm12998-201ENSMUST00000122445 789 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm25150-201ENSMUST00000157121 60 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm23592-201ENSMUST00000157859 117 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm25490-201ENSMUST00000158734 130 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm20574-201ENSMUST00000182867 917 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm28196-201ENSMUST00000187719 640 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm28155-201ENSMUST00000191066 151 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm43227-201ENSMUST00000202239 677 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm6462-201ENSMUST00000081488 304 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm22043-201ENSMUST00000082993 158 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm10212-201ENSMUST00000087884 324 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Nkx3-1P97436 Gm7646-201ENSMUST00000198590 1346 ntBASIC2.93□□□□□ -1.94
Nkx3-1P97436 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm23256-201ENSMUST00000102235 110 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm26140-201ENSMUST00000103807 110 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm12149-201ENSMUST00000117511 654 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm11866-201ENSMUST00000120209 335 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Nkx3-1P97436 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm22908-201ENSMUST00000177620 110 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm3454-201ENSMUST00000185571 412 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm38330-201ENSMUST00000192743 959 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm44869-201ENSMUST00000208836 357 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm18644-201ENSMUST00000211458 815 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gm44624-201ENSMUST00000208700 2278 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nkx3-1P97436 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC2.92□□□□□ -1.94
Nkx3-1P97436 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Nkx3-1P97436 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Nkx3-1P97436 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Nkx3-1P97436 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.91□□□□□ -1.94
Nkx3-1P97436 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Nkx3-1P97436 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.91□□□□□ -1.94
Nkx3-1P97436 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Nkx3-1P97436 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Nkx3-1P97436 Gm25308-201ENSMUST00000104171 158 ntBASIC2.91□□□□□ -1.94
Nkx3-1P97436 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Nkx3-1P97436 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC2.91□□□□□ -1.94
Nkx3-1P97436 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Nkx3-1P97436 Gm13557-201ENSMUST00000120771 382 ntBASIC2.91□□□□□ -1.94
Nkx3-1P97436 Gm7308-201ENSMUST00000121087 447 ntBASIC2.91□□□□□ -1.94
Nkx3-1P97436 Gm26027-201ENSMUST00000122725 268 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms