Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm18011-201ENSMUST00000203717 565 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sf3b6P59708 Gm17988-201ENSMUST00000208796 535 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Gm17999-201ENSMUST00000211568 542 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.71□□□□□ -1.66
Sf3b6P59708 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.71□□□□□ -1.66
Sf3b6P59708 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.71□□□□□ -1.66
Sf3b6P59708 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sf3b6P59708 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sf3b6P59708 Gm23679-201ENSMUST00000083161 119 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Gm22740-201ENSMUST00000083439 109 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sf3b6P59708 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sf3b6P59708 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Sf3b6P59708 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.71□□□□□ -1.66
Sf3b6P59708 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sf3b6P59708 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sf3b6P59708 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm15147-201ENSMUST00000122263 483 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm22210-201ENSMUST00000158101 144 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm27754-201ENSMUST00000183340 126 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm24949-201ENSMUST00000183609 215 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm27855-201ENSMUST00000184122 128 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm28951-201ENSMUST00000190742 313 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Mir3970-201ENSMUST00000199287 90 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm29781-201ENSMUST00000203862 478 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm44371-201ENSMUST00000204148 467 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm44055-201ENSMUST00000204376 247 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm44092-201ENSMUST00000204470 258 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm2926-201ENSMUST00000205625 239 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm10709-201ENSMUST00000213318 480 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm22423-201ENSMUST00000082861 184 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Mir143-201ENSMUST00000083511 63 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.7□□□□□ -1.66
Sf3b6P59708 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sf3b6P59708 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sf3b6P59708 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm16089-201ENSMUST00000117679 336 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm12235-201ENSMUST00000118596 170 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm11262-201ENSMUST00000119326 833 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm11742-201ENSMUST00000119903 233 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm23169-201ENSMUST00000157157 112 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm20545-201ENSMUST00000174739 210 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm21726-201ENSMUST00000179654 392 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sf3b6P59708 Mir6413-201ENSMUST00000184049 108 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm28995-201ENSMUST00000186625 261 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm29196-201ENSMUST00000189239 618 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm37692-201ENSMUST00000192633 232 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm36939-201ENSMUST00000194889 439 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Mir6906-201ENSMUST00000198998 58 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm43440-201ENSMUST00000201957 729 ntBASIC4.69□□□□□ -1.66
Sf3b6P59708 Gm5322-201ENSMUST00000206142 699 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms