Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm12656-201ENSMUST00000118149 577 ntBASIC4.12□□□□□ -1.75
NcanP55066 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NcanP55066 Gm14516-201ENSMUST00000120012 252 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm14713-201ENSMUST00000122362 686 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm24840-201ENSMUST00000122603 147 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm25966-201ENSMUST00000157169 117 ntBASIC4.12□□□□□ -1.75
NcanP55066 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm23402-201ENSMUST00000178130 107 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm29552-201ENSMUST00000190548 660 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm44395-201ENSMUST00000197056 153 ntBASIC4.12□□□□□ -1.75
NcanP55066 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.12□□□□□ -1.75
NcanP55066 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm18602-201ENSMUST00000209794 851 ntBASIC4.12□□□□□ -1.75
NcanP55066 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.12□□□□□ -1.75
NcanP55066 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.12□□□□□ -1.75
NcanP55066 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.12□□□□□ -1.75
NcanP55066 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.12□□□□□ -1.75
NcanP55066 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
NcanP55066 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NcanP55066 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.12□□□□□ -1.75
NcanP55066 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NcanP55066 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.12□□□□□ -1.75
NcanP55066 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NcanP55066 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.11□□□□□ -1.75
NcanP55066 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 Gm5583-201ENSMUST00000174328 1519 ntBASIC4.11□□□□□ -1.75
NcanP55066 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NcanP55066 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 Gm14163-201ENSMUST00000117342 217 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm16005-201ENSMUST00000120515 269 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.11□□□□□ -1.75
NcanP55066 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 Gm25185-201ENSMUST00000157754 96 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm25553-201ENSMUST00000158076 79 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm25860-201ENSMUST00000158252 126 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.11□□□□□ -1.75
NcanP55066 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 Gm27025-201ENSMUST00000182392 942 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm29484-201ENSMUST00000186067 324 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm37837-201ENSMUST00000191743 604 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm17954-201ENSMUST00000195893 607 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm35570-201ENSMUST00000198730 681 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm18306-201ENSMUST00000207338 569 ntBASIC4.11□□□□□ -1.75
NcanP55066 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.11□□□□□ -1.75
NcanP55066 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.11□□□□□ -1.75
NcanP55066 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.11□□□□□ -1.75
NcanP55066 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.11□□□□□ -1.75
NcanP55066 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.11□□□□□ -1.75
NcanP55066 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.11□□□□□ -1.75
NcanP55066 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.11□□□□□ -1.75
NcanP55066 AC156574.2-201ENSMUST00000228023 282 ntBASIC4.11□□□□□ -1.75
NcanP55066 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NcanP55066 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NcanP55066 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NcanP55066 Gm23846-201ENSMUST00000083835 107 ntBASIC4.11□□□□□ -1.75
NcanP55066 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.11□□□□□ -1.75
NcanP55066 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
NcanP55066 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.11□□□□□ -1.75
NcanP55066 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NcanP55066 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NcanP55066 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.1□□□□□ -1.75
NcanP55066 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.1□□□□□ -1.75
NcanP55066 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.1□□□□□ -1.75
NcanP55066 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NcanP55066 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NcanP55066 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.1□□□□□ -1.75
NcanP55066 Gm12889-201ENSMUST00000118684 241 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm11890-201ENSMUST00000119585 417 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm7846-201ENSMUST00000145844 274 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm25971-201ENSMUST00000158953 286 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm13147-202ENSMUST00000177526 1173 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm27828-201ENSMUST00000184108 119 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm43368-201ENSMUST00000200638 409 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.1□□□□□ -1.75
NcanP55066 Gm34005-201ENSMUST00000215834 282 ntBASIC4.1□□□□□ -1.75
NcanP55066 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.1□□□□□ -1.75
NcanP55066 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NcanP55066 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
NcanP55066 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
NcanP55066 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NcanP55066 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NcanP55066 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms