Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Shmt1P50431 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Shmt1P50431 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm7312-201ENSMUST00000118798 469 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm12852-201ENSMUST00000119478 719 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm14619-201ENSMUST00000120480 168 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm11321-201ENSMUST00000121257 902 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm23583-201ENSMUST00000158533 289 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm20701-201ENSMUST00000176082 347 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm23619-201ENSMUST00000178411 94 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm25474-201ENSMUST00000179052 94 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm22047-201ENSMUST00000179176 94 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm27611-201ENSMUST00000184690 108 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm28404-201ENSMUST00000190242 453 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm43026-201ENSMUST00000202972 325 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm44261-201ENSMUST00000203337 209 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm44054-201ENSMUST00000203814 372 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.84□□□□□ -1.63
Shmt1P50431 Gm45392-201ENSMUST00000210441 214 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.84□□□□□ -1.63
Shmt1P50431 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.84□□□□□ -1.63
Shmt1P50431 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Mecom-201ENSMUST00000061088 348 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm25079-201ENSMUST00000082529 203 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Gm23875-201ENSMUST00000083711 318 ntBASIC4.84□□□□□ -1.63
Shmt1P50431 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Shmt1P50431 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Shmt1P50431 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Shmt1P50431 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Shmt1P50431 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Shmt1P50431 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.84□□□□□ -1.64
Shmt1P50431 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Shmt1P50431 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm12062-201ENSMUST00000117533 259 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm14172-201ENSMUST00000118255 644 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm16331-201ENSMUST00000144274 498 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm26347-201ENSMUST00000157526 131 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm25909-201ENSMUST00000157619 121 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm24853-201ENSMUST00000158026 121 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm24901-201ENSMUST00000158125 110 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm24897-201ENSMUST00000179033 107 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm21850-201ENSMUST00000179792 359 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.83□□□□□ -1.64
Shmt1P50431 Mir6541-201ENSMUST00000183649 110 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm28151-201ENSMUST00000189404 951 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm29524-201ENSMUST00000190819 699 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm37682-201ENSMUST00000191776 522 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm38019-201ENSMUST00000195133 380 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Shmt1P50431 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm19761-201ENSMUST00000205372 391 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm44779-201ENSMUST00000206937 708 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm17780-201ENSMUST00000207142 612 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm45530-201ENSMUST00000211658 225 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.83□□□□□ -1.64
Shmt1P50431 Gm20304-201ENSMUST00000218168 444 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.83□□□□□ -1.64
Shmt1P50431 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms