Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Nkx2-1P50220 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Nkx2-1P50220 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx2-1P50220 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.41□□□□□ -1.86
Nkx2-1P50220 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx2-1P50220 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx2-1P50220 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx2-1P50220 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Nkx2-1P50220 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Nkx2-1P50220 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Nkx2-1P50220 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Nkx2-1P50220 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.4□□□□□ -1.86
Nkx2-1P50220 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Nkx2-1P50220 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.4□□□□□ -1.86
Nkx2-1P50220 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Nkx2-1P50220 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Nkx2-1P50220 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm24831-201ENSMUST00000116778 126 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm15752-201ENSMUST00000117427 394 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm11878-201ENSMUST00000117908 400 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm14878-201ENSMUST00000118167 293 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm13273-201ENSMUST00000119737 159 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm15168-201ENSMUST00000121057 316 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm24532-201ENSMUST00000157951 286 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm26171-201ENSMUST00000158422 131 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm17177-201ENSMUST00000169144 483 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm18667-201ENSMUST00000186523 484 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm20819-201ENSMUST00000191091 925 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm43489-201ENSMUST00000196810 993 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm18748-201ENSMUST00000198507 622 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm34091-201ENSMUST00000200875 604 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm3189-201ENSMUST00000205595 832 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm18597-201ENSMUST00000209519 694 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm18160-201ENSMUST00000214279 827 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm19987-201ENSMUST00000216339 499 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Mir421-201ENSMUST00000083575 76 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm22826-201ENSMUST00000083774 165 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Mir465-201ENSMUST00000093563 74 ntBASIC3.4□□□□□ -1.87
Nkx2-1P50220 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Nkx2-1P50220 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm22473-201ENSMUST00000104114 132 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm8757-201ENSMUST00000119660 372 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm13430-201ENSMUST00000121366 288 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm13745-201ENSMUST00000121994 527 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm15077-201ENSMUST00000122344 362 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm26424-201ENSMUST00000122530 104 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm25883-201ENSMUST00000157781 271 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm22529-201ENSMUST00000158817 123 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms