Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.98□□□□□ -1.45
Rfx1P48377 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.98□□□□□ -1.45
Rfx1P48377 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.98□□□□□ -1.45
Rfx1P48377 Gm24763-201ENSMUST00000083688 190 ntBASIC5.98□□□□□ -1.45
Rfx1P48377 Gm26107-201ENSMUST00000083972 107 ntBASIC5.98□□□□□ -1.45
Rfx1P48377 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.98□□□□□ -1.45
Rfx1P48377 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.98□□□□□ -1.45
Rfx1P48377 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Rfx1P48377 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.98□□□□□ -1.45
Rfx1P48377 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Rfx1P48377 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Rfx1P48377 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Rfx1P48377 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Rfx1P48377 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Rfx1P48377 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Rfx1P48377 Mir599-201ENSMUST00000102378 88 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Mir466j-201ENSMUST00000116876 122 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm11975-201ENSMUST00000118772 481 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm9078-201ENSMUST00000119126 617 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm5401-201ENSMUST00000122444 365 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.97□□□□□ -1.45
Rfx1P48377 Gm23539-201ENSMUST00000157537 224 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm22101-201ENSMUST00000157928 103 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Rfx1P48377 Gm17152-201ENSMUST00000172430 535 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm24100-201ENSMUST00000178592 79 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm24137-201ENSMUST00000180055 79 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm24518-201ENSMUST00000180275 94 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm22391-201ENSMUST00000180356 79 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm28418-201ENSMUST00000186179 423 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.97□□□□□ -1.45
Rfx1P48377 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.97□□□□□ -1.45
Rfx1P48377 Gm19147-201ENSMUST00000199622 652 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm44371-201ENSMUST00000204148 467 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm8039-201ENSMUST00000204758 712 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Rfx1P48377 Gm44718-201ENSMUST00000206886 359 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm19126-201ENSMUST00000207896 509 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Gm6303-201ENSMUST00000210123 471 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 AV026068-237ENSMUST00000226075 572 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Rfx1P48377 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.97□□□□□ -1.45
Rfx1P48377 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Rfx1P48377 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Rfx1P48377 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Rfx1P48377 Gm24460-201ENSMUST00000082731 106 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Mir449a-201ENSMUST00000083641 91 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.97□□□□□ -1.45
Rfx1P48377 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Rfx1P48377 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Rfx1P48377 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Rfx1P48377 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Rfx1P48377 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.96□□□□□ -1.45
Rfx1P48377 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.96□□□□□ -1.45
Rfx1P48377 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.96□□□□□ -1.45
Rfx1P48377 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.96□□□□□ -1.45
Rfx1P48377 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Rfx1P48377 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Rfx1P48377 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Rfx1P48377 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rfx1P48377 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Rfx1P48377 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rfx1P48377 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rfx1P48377 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rfx1P48377 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.96□□□□□ -1.46
Rfx1P48377 Gm25111-201ENSMUST00000116686 147 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm24689-201ENSMUST00000157760 104 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm23030-201ENSMUST00000158004 273 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm26172-201ENSMUST00000158421 134 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm3470-201ENSMUST00000160819 420 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Rfx1P48377 Gm24464-201ENSMUST00000179697 107 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm24968-201ENSMUST00000179817 107 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rfx1P48377 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rfx1P48377 Gm43559-201ENSMUST00000198755 466 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm43968-201ENSMUST00000203388 389 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm45215-201ENSMUST00000206407 395 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm8785-201ENSMUST00000220259 487 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.96□□□□□ -1.46
Rfx1P48377 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Rfx1P48377 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm6462-201ENSMUST00000081488 304 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 Gm25792-201ENSMUST00000083289 100 ntBASIC5.96□□□□□ -1.46
Rfx1P48377 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rfx1P48377 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Rfx1P48377 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms