Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm22020-201ENSMUST00000104358 136 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Lipe-203ENSMUST00000105177 1251 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm13268-201ENSMUST00000117485 433 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm12509-201ENSMUST00000118033 609 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm12808-201ENSMUST00000120597 404 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm11233-201ENSMUST00000122357 634 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm19203-201ENSMUST00000174049 939 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm6625-201ENSMUST00000177870 272 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm6113-201ENSMUST00000180319 639 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm17916-202ENSMUST00000187634 1187 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm42976-201ENSMUST00000200313 222 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm6719-201ENSMUST00000202067 335 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm29785-201ENSMUST00000217033 383 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC2.99□□□□□ -1.93
Sdc1P18828 Platr25-208ENSMUST00000222602 939 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 LOC667541-201ENSMUST00000223408 278 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Sdc1P18828 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Sdc1P18828 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm24626-201ENSMUST00000082621 161 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm23456-201ENSMUST00000083335 137 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Mir370-201ENSMUST00000083499 79 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Mir34b-201ENSMUST00000083558 84 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm10780-201ENSMUST00000099459 285 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Sdc1P18828 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Sdc1P18828 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm23319-201ENSMUST00000104467 131 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Mir208b-201ENSMUST00000104735 77 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Sdc1P18828 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm11577-201ENSMUST00000118030 737 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm13379-201ENSMUST00000118053 621 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm13678-201ENSMUST00000118926 340 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm11693-201ENSMUST00000119625 565 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm14175-201ENSMUST00000119835 241 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm15387-201ENSMUST00000120421 648 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm15733-201ENSMUST00000132957 242 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm25883-201ENSMUST00000157781 271 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm25438-201ENSMUST00000158281 110 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm23583-201ENSMUST00000158533 289 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm24550-201ENSMUST00000158648 279 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm22177-201ENSMUST00000175002 158 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Mir6401-201ENSMUST00000184499 109 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm18547-201ENSMUST00000192439 811 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm37164-201ENSMUST00000192809 637 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm44016-201ENSMUST00000203463 164 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm44727-201ENSMUST00000204225 451 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm43954-201ENSMUST00000204634 544 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Sdc1P18828 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
Sdc1P18828 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Sdc1P18828 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Sdc1P18828 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Sdc1P18828 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm25799-201ENSMUST00000082643 107 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Mir17-201ENSMUST00000083574 84 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm22350-201ENSMUST00000083924 156 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm22864-201ENSMUST00000083950 130 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm5518-201ENSMUST00000084171 648 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.98□□□□□ -1.93
Sdc1P18828 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Sdc1P18828 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Sdc1P18828 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Sdc1P18828 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.98□□□□□ -1.93
Sdc1P18828 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm12852-201ENSMUST00000119478 719 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm12137-201ENSMUST00000119565 346 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm11876-201ENSMUST00000120002 269 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm13745-201ENSMUST00000121994 527 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms