Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdx1P18111 Mir551b-201ENSMUST00000102165 98 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm14365-201ENSMUST00000117535 587 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm11708-201ENSMUST00000119530 832 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm12137-201ENSMUST00000119565 346 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm12313-201ENSMUST00000121347 421 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm14578-201ENSMUST00000122166 391 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm13487-201ENSMUST00000122240 864 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm23183-201ENSMUST00000122595 323 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm25177-201ENSMUST00000122634 117 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm23228-201ENSMUST00000157296 270 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm17117-201ENSMUST00000163665 299 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm8161-201ENSMUST00000168739 481 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm4207-201ENSMUST00000173144 960 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm25944-201ENSMUST00000178758 94 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.15□□□□□ -1.91
Cdx1P18111 Mir6537-201ENSMUST00000184150 110 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm27445-201ENSMUST00000184484 72 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm37817-201ENSMUST00000195276 434 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.15□□□□□ -1.91
Cdx1P18111 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.15□□□□□ -1.91
Cdx1P18111 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Cdx1P18111 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm46194-201ENSMUST00000218136 320 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Cdx1P18111 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdx1P18111 AF357341-201ENSMUST00000083088 75 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm26165-201ENSMUST00000083791 138 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm23850-201ENSMUST00000083830 169 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Cdx1P18111 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Cdx1P18111 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.15□□□□□ -1.91
Cdx1P18111 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Cdx1P18111 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdx1P18111 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdx1P18111 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 Gm13574-201ENSMUST00000120482 394 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm15263-201ENSMUST00000121556 642 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm15488-201ENSMUST00000121682 670 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm5958-201ENSMUST00000147698 297 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.14□□□□□ -1.91
Cdx1P18111 Gm5527-201ENSMUST00000179821 642 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm27695-201ENSMUST00000184301 91 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 Gm9379-201ENSMUST00000196790 646 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.14□□□□□ -1.91
Cdx1P18111 Gm17780-201ENSMUST00000207142 612 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.14□□□□□ -1.91
Cdx1P18111 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cdx1P18111 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cdx1P18111 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdx1P18111 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdx1P18111 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdx1P18111 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cdx1P18111 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdx1P18111 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdx1P18111 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cdx1P18111 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdx1P18111 Gm15994-201ENSMUST00000118029 402 ntBASIC3.13□□□□□ -1.91
Cdx1P18111 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.13□□□□□ -1.91
Cdx1P18111 Gm14627-201ENSMUST00000118931 567 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms