Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.65□□□□□ -1.51
Msx1P13297 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.65□□□□□ -1.51
Msx1P13297 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
Msx1P13297 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Msx1P13297 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Msx1P13297 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Msx1P13297 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.65□□□□□ -1.51
Msx1P13297 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Msx1P13297 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Msx1P13297 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.65□□□□□ -1.51
Msx1P13297 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.64□□□□□ -1.51
Msx1P13297 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Msx1P13297 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Msx1P13297 Gm24230-201ENSMUST00000104313 129 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm11693-201ENSMUST00000119625 565 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm15331-201ENSMUST00000120225 385 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm13998-201ENSMUST00000120952 335 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm25321-201ENSMUST00000122558 102 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Gm23669-201ENSMUST00000157470 128 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm23209-201ENSMUST00000158667 110 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm22257-201ENSMUST00000158687 301 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm16326-201ENSMUST00000162843 414 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm6214-201ENSMUST00000178845 541 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Gm37235-201ENSMUST00000195171 59 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.64□□□□□ -1.51
Msx1P13297 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm9202-201ENSMUST00000223036 437 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm7676-201ENSMUST00000084055 319 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.64□□□□□ -1.51
Msx1P13297 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.64□□□□□ -1.51
Msx1P13297 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Msx1P13297 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Msx1P13297 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Msx1P13297 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx1P13297 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.63□□□□□ -1.51
Msx1P13297 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx1P13297 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Msx1P13297 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx1P13297 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Msx1P13297 Gm25875-201ENSMUST00000104323 107 ntBASIC5.63□□□□□ -1.51
Msx1P13297 n-R5s52-201ENSMUST00000104614 113 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm11490-201ENSMUST00000118128 272 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm12495-201ENSMUST00000119750 447 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm24630-201ENSMUST00000122768 106 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.63□□□□□ -1.51
Msx1P13297 Gm23000-201ENSMUST00000157083 139 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Mir3062-201ENSMUST00000174986 105 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm27470-201ENSMUST00000184070 210 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm28967-201ENSMUST00000187351 281 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx1P13297 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx1P13297 Gm28872-201ENSMUST00000191518 158 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm36954-201ENSMUST00000195362 363 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm18405-201ENSMUST00000220743 511 ntBASIC5.63□□□□□ -1.51
Msx1P13297 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC5.63□□□□□ -1.51
Msx1P13297 AC101945.1-201ENSMUST00000226734 466 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm5830-201ENSMUST00000049117 443 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Gm6104-201ENSMUST00000078030 603 ntBASIC5.63□□□□□ -1.51
Msx1P13297 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms