Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm7855-201ENSMUST00000137737 687 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm23753-201ENSMUST00000157575 149 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm23128-202ENSMUST00000196578 133 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm44582-201ENSMUST00000209125 445 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm16420-201ENSMUST00000120258 856 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm26015-201ENSMUST00000104402 125 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm14593-201ENSMUST00000119948 294 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm17166-201ENSMUST00000172006 431 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm37684-201ENSMUST00000192779 355 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.07□□□□□ -1.92
Col6a3E9PWQ3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm24075-201ENSMUST00000158175 72 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm18015-201ENSMUST00000214879 316 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm2436-201ENSMUST00000219562 774 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr1153-201ENSMUST00000052300 957 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm25130-201ENSMUST00000082650 156 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Mir322-201ENSMUST00000083484 95 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm42772-201ENSMUST00000199945 3041 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm22968-201ENSMUST00000157955 118 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm13555-201ENSMUST00000121668 319 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Gm22264-201ENSMUST00000178200 107 ntBASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col6a3E9PWQ3 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm15212-201ENSMUST00000122403 466 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm6796-201ENSMUST00000211919 243 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm7327-201ENSMUST00000120925 652 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm44431-201ENSMUST00000203500 413 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a3E9PWQ3 Mir5123-201ENSMUST00000177794 83 ntBASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Gm27399-201ENSMUST00000184250 78 ntBASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Gm24240-201ENSMUST00000157785 135 ntBASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.04□□□□□ -1.92
Col6a3E9PWQ3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms